Open-access Morpho-agronomic characterization and genetic divergence in lentil genotypes

Caracterização morfoagronômica e divergência genética em genótipos de lentilha

ABSTRACT

Lentil production has been increasing in Brazil, due to strong national and international demand. Despite the economic importance, few cultivars are available on the Brazilian market. The aim of this study was to evaluate 48 lentil inbred lines and one commercial cultivar (Silvina), based on morpho-agronomic traits and to identify genotypes which can be used in a plant breeding program. Twenty-one morpho-agronomic descriptors (nine qualitative and twelve quantitative) were used. The descriptors showed genetic variability among the genotypes. Clustering techniques using characterization data allowed to identify genetically divergent genotypes as well as identify superior genotypes in relation to agronomic traits: FLIP2010-8L and FLIP2010-12L (similarity group I), FLIP2010-99L, FLIP2010-20L and FLIP2010-106L (group II), FLIP90-25L and 6031 (group III), FLIP2007-16L (group IV) and the commercial cultivar Silvina (group V). We concluded that these genotypes have the potential to be used in lentil breeding programs.

Keywords: Lens culinaris; genetic resources; genetic variability; productivity

RESUMO

A produção de lentilha apresenta tendência de crescimento no Brasil devido a uma forte demanda do mercado nacional e internacional por esta hortaliça leguminosa. Apesar da importância econômica, existem poucas cultivares disponíveis no mercado brasileiro. O objetivo deste estudo foi avaliar 48 linhagens de lentilha e uma cultivar comercial (Silvina), com base em características morfoagronômicas, e identificar genótipos que possam ser empregados no melhoramento genético. Foram utilizados 21 descritores morfoagronômicos (nove qualitativos e doze quantitativos) que evidenciaram a existência de variabilidade genética entre os genótipos estudados. A associação das técnicas de agrupamento com os dados de caracterização possibilitou a identificação de genótipos geneticamente divergentes e, ao mesmo tempo, superiores quanto a características agronômicas: FLIP2010-8L e FLIP2010-12L (grupo de similaridade I), FLIP2010-99L, FLIP2010-20L e FLIP2010-106L (grupo II), FLIP90-25L e 6031 (grupo III), FLIP2007-16L (grupo IV) e a cultivar comercial Silvina (grupo V). Esses genótipos apresentam potencial para serem utilizados em programas de melhoramento genético da espécie.

Palavras-chave: Lens culinaris; recursos genéticos; variabilidade genética; produtividade

Lentil (Lens culinaris) belongs to Fabaceae family. This crop is of great importance for global economy, and it stands out for its nutritional value and food safety issues for millions of people around the world, especially in under-developed countries (Rawal & Bansal, 2019). The grains are nutritive, rich in proteins, carbohydrates, micronutrients, vitamins and aminoacids, lysine and tryptophan (Shahwar et al., 2017). The commercial use of lentils includes whole grain, split, peeled or processed as flour. The plant can fix atmospheric nitrogen in association with Rhizobium sp. (Rasheed et al., 2020), and the cultivation is a good possibility for crop rotation or succession, since lentil benefits, directly, soil fertility (Liu et al., 2019). Besides, the plant shows climatic adaptability (Strydhorst et al., 2015), which makes it widely distributed around the world.

Nowadays, Canada is the largest producer and exporter of lentil, 32.8% of total global production. Although India is the country with the largest cultivated area, about 25.4% of world production (Faostat, 2020), the country has low average crop productivity (731 kg ha-1) comparing with the average productivity worldwide (1.041 kg ha-1) (Faostat, 2020). This low productivity leads the Indian country to frequent imports of green and red lentils in order to meet its own demand. Brazilian lentil production is still negligible and domestic demand is supplied by imports, mainly from Canada, Argentina and The United States. In 2020, Brazil imported about 21 thousand tons, which means about US$ 13.3 millions on lentil import (Comex Stat, 2021).

In Brazil, mainly in Midwest region, lentil is an excellent option for drip-irrigated crop during winter, reaching average productivities of 1.200 to 1.600 kg ha-1 in experimental conditions (Giordano & Nascimento, 2009). Sowing can be performed in April or May, and optimal temperatures for germination and development of the crop are 18 and 24ºC, respectively (Vieira & Lima, 2016). Thus, due to the productive potential verified, favorable climatic conditions and to an increasing demand of national and international market, mainly the Indian markets, Brazilian agribusiness is able to consolidate its production.

Although few lentil breeding studies have been carried out in Brazil in 1999, cultivar Silvina was released (Embrapa Hortaliças, 2014) for green lentil production, big seed (type macrosperm) and yellow cotyledon, the preferred type among Brazilian consumers (Vieira et al., 2001). Worldwide, small-seed red lentils (microsperm type) and orange cotyledon are the most produced and commercialized worldwide, due to the international market demand, mainly from the Indian subcontinent (Rawal & Bansal, 2019). However, this type of lentil has not been produced in Brazil yet.

International Center for Agricultural Research in the Dry Areas (ICARDA), holder of the largest collection of lentils in the world (Kumar et al., 2013), made available to Embrapa Hortaliças genotypes of macro and microsperm types, in order to expand the genetic basis and resume the breeding program for this species in Brazil. However, information about these genotypes are unavailable, and studies on morphological and agronomical characterization are necessary. These studies can contribute for the breeding program, identifying genotypes which present precocity, high yield, grain characteristics that meet the requirements of traders and consumers, adaptation to mechanized harvest and other agronomic traits of interest (Malhotra et al., 2019).

Studies on characterization and evaluation performed through observations (qualitative traits) and measurements (quantitative traits) using morphological descriptors are able to provide the first genetic variability estimates in the germplasm (Burle & Oliveira, 2010), forming an important data basis which can subsidize genetic breeding for different purposes. Besides, using multivariate analysis techniques, based on dissimilarity measures, make it possible to evaluate, simultaneously in relation to several traits, the genetic divergence among the genotypes.

This study aimed to evaluate a set of lentil genotypes provided by ICARDA based on morpho-agronomic traits to identify promising genotypes which can be exploited in breeding programs.

MATERIAL AND METHODS

The experiments were carried out at Embrapa Hortaliças experimental field, Brasília-DF, (15°56’14’S, 48°08’31’W, 1000 m altitude), during 2017 and 2018. According to Köppen (Kottek et al., 2006), the local climate is Aw type, with dry winter. The temperature during the crop cycle ranged from 27.4ºC to 15.8ºC (maximum and minimum, respectively) in 2017, and the temperature ranged from 27.4ºC to 15.7ºC, in 2018. Relative humidity in these two years was 55.6% and average rainfall was 1.7 mm/day (Inmet, 2018).

We evaluated 48 lentil genotypes from International Center for Agricultural Research in the Dry Areas (ICARDA). Cultivar Silvina was used as control (Embrapa Hortaliças, 2014) (Table 1). The soil was classified as Typic Hapludox, the chemical properties in 0-20 cm layer, in 2017, immediately before the beginning of the experiment were: pH (water)= 5.2; pH (CaCl2)= 5.2; organic matter = 3.0%; P(Mehlich)= 2.9 mg dm-3; K (Mehlich)= 191.59 mg dm-3; Ca (KCl)= 0.5 cmolc dm-3; Mg (KCl)= 0.5 cmolc dm-3; Al (Mehlich)= 0.9 cmolc dm3; H+Al (SMP)= 4.3 cmolc dm-3; cation exchange capacity at pH 7.0 (CEC)= 5.8 cmolc dm-3; base saturation (V)= 27%; aluminum saturation (m)= 37%; B(hot water)= 0.03 mg dm-3; Cu(Mehlich)= 1.60 mg dm-3; Fe (Mehlich)= 84 mg dm-3; Mn(Mehlich)= 22.3 mg dm-3; Zn(Mehlich)= 1.90 mg dm-3; S[Ca(H2PO4)2]= 2.6 mg dm-3.

Table 1
Identification, pedigree and origin of 48 lentil inbred lines (Lens culinaris) from International Center for Agricultural Research in the Dry Areas (ICARDA) and commercial cultivar Silvina. Brasília, Embrapa Hortaliças, 2020.

The experimental design was randomized blocks with 49 treatments (48 inbred lines and cultivar Silvina), with two replicates in 2017 and three replicates in 2018. The plots consisted of one 4-meter-long row, considering two planting rows, spaced 0.50 m between each other, with 10 plants each, totalizing a useful area of 2.0 m2 per plot. Sowings were carried out in the same area on May 10th and May 24th, 2017 and 2018, respectively, 30 days after application of 2000 kg ha-1 of dolomitic limestone (PRNT 80%), in each of the years, based on the level of base saturation showed by the chemical analysis of the first experimental year. In both experiments, sowing fertilization was carried out using 16 kg ha-1 N, 120 kg ha-1 P2O5 and 64 kg ha-1 K2O in the furrows. Seeds were not inoculated with Rhizobium sp. Top-dressing fertilization was performed at 30 days after emergence (DAE) with application of 100 kg ha-1 N (urea) (Vieira, 2003).

We used sprinkler irrigation system, with a daily gross water depth (from 5 to 6 mm) according to Giordano et al. (1988) recommendation, applied at more frequent intervals during the emergence period until the plants were fully developed. The irrigation was temporarily suspended in two cycle stages: before the beginning of flowering and at the end of the grain filling. This practice is carried out in order to stimulate grain production and maturation, respectively (Vieira & Lima, 2016). A sensor-based device (tensiometer 40 Kpa, brand Irrigas®, model HID02) determined the irrigation shifts. The gadget was installed at two depths (15 and 30 cm) (Marouelli & Calbo, 2009).

Weeds were controlled by hand hoeing throughout the crop cycle. Insecticides and fungicides were not applied, despite some insect-pest had been found in the experiment, such as caterpillars, thrips, aphids, mining larvae and bedbugs, without species identification, and diseases (soil fungus and powdery mildew).

Morpho-agronomic characterization

Genotype characterization was carried out based on fifteen descriptors established by International Union for the Protection of new Varieties of Plants (UPOV, 2015), nine being qualitative traits (growth habit, anthocyanin pigmentation in stem, branching intensity, leaf color intensity, leaflet shape, flower color, violet streaks on the flower, seed coating color and cotyledon color) and six quantitative traits (number of days until flowering starts, plant height, pod length, seed width and weight of 1000 seeds). Additionally, information was collected on the following quantitative traits: height of the first pod insertion (evaluated at the beginning of the reproductive phase, using a graduated ruler, between the ground level and the first pod of the lower third of the plant), number of pods per plant (counting the number of pods per plant), number of seeds per plant (counting the total number of seeds per plant), seed yield per plant (seed weight, in grams, per plant), productivity (total weight of seeds per plot, in grams) and cycle duration (counting the number of days from sowing to harvest).

Grouping analysis

In order to get information using morpho-agronomic variables, the authors performed multivariate analysis using cluster method (Cruz et al., 2012). Qualitative and quantitative variables have been transformed into binary data. Using these data, the dissimilarity values were calculated using Jaccard’s coefficient and projected in a dendrogram created using Unweighted Pair-Group Method Arithmetic Average (UPGMA). Besides, Tocher’s optimized method was used to verify coherence of the groups formed in the dendrogram.

Statistical analysis

For qualitative descriptors, the percentual frequencies of each category were calculated and, for quantitative traits, the experimental data were submitted to individual and joint variance analysis, using F test. The authors needed to transform number of pods per plant, number of seeds per plant, seed yield and weight of 1000 seeds to x+0.5 and productivity to log (x + 0.5)assumptions of the analysis of variance. The joint analysis was carried out under conditions of homogeneity of residual variances (Pimentel-Gomes, 2009), using SAS 9.2 software (SAS, 2009). When inbred line x year interaction was significant, the authors decided to unfold this interaction and the average test of double-entry table average test was performed with adjusted averages using the Scott-Knott clustering (p≤0.05), with the aid of Genes software (Cruz, 2013).

RESULTS AND DISCUSSION

Qualitative traits

Percentage frequency distribution of qualitative traits showed variations among the studied genotypes (48 inbred lines + cultivar Silvina). Semi-erect growth habit was verified in 46.9% of genotypes, followed by erect growth habit (40.9%) and by prostrate growth habit (12.2%). Only 8.2% of genotypes showed anthocyanin pigmentation in the stem, which was completely absent (green stem) for the rest 91.8%.

For branching intensity, 91.8% of genotypes showed the strong variant, whereas the weak variant was verified in 8.2% genotypes. The leaf color intensity for medium-green hue was predominant (91.8%), whereas strong green color occurred in 8.2% of the genotypes. The authors observed that the difference between the leaf color intensity variant might have been influenced by luminosity at the moment of evaluation, as well as by soil nitrogen level (Ferreira et al., 2011). The oval leaflet shape (59.2%) predominated in relation to the elliptical one (40.8%).

White flowers were observed in 97.9% of the genotypes. Only FLIP2009-15L showed light pink flowers. This trait is important for verifying the varietal purity (Roy et al., 2012), since the parameter “flower color” can vary depending on the genotype, flower age and environmental conditions (Sharma, 2009). All the genotypes showed violet streaks on the flowers.

Red-coated seeds showing orange cotyledon were found in 43 genotypes (87.8%). Green coating was observed in 12.2% and green cotyledon in 10.2% of the genotypes. Only cultivar Silvina showed yellow cotyledon.

Quantitative traits

Quantitative traits evaluated in this study were influenced by genotypes and/or year of evaluation, showing significant differences (p≤0.05), except for plant height (Table 2). Significant interaction (p≤0.05) year x genotype was observed only for number of days until flowering beginning. Thus, studies on the unfolding of these factors were carried out (Table 3).

Table 2
Summary of the joint analysis of variance for quantitative morpho-agronomic traits of 48 lentil inbred lines (Lens culinaris) and the commercial cultivar Silvina in two years, 2017 and 2018. Brasília, Embrapa Hortaliças, 2020.

Table 3
Average values of the number of days until flowering (NDIF), plant height (APLA), height of first pod insertion (IVAG), pod length (CVAG), pod width (LVAG), number of pods per plant (NVAG), number of seeds per plant (NSEM), seed yield per plant (RSEM), seed width (LSEM), weight of 1000 seeds (P1000), productivity (PROD) crop cycle duration (CI) of 48 lentil inbred lines and cultivar Silvina in two years, 2017 and 2018. Brasília, Embrapa Hortaliças, 2020.

Table 3
Continuation

The number of days until the flowering beginning ranged from 50 to 107.5 in the first year (2017) and from 59 to 92 in the second year (2018) (Table 3). Vieira (2003), working with lentil genotypes from ICARDA, in Coimbra-MG, verified values similar to the ones found in this study for flowering beginning (60 and 102 days after sowing). Cultivar Silvina stood out among the genotypes in two years of evaluation, maintaining its early-flowering pattern and presenting 50% of the plants with, at least, one flower open at 50 days and 59 days in the first and second years, respectively. Genotype FLIP2010-20L did not differ from cultivar Silvina in the second year of the experiment, showing flowering beginning at 65 days. Genotypes 81S15, FLIP2007-28L, FLIP2007-74L, FLIP2007-77L, FLIP2009-2L, FLIP2009-4L, FLIP2009-7L, FLIP2009-15L, FLIP2009-18L, FLIP2009-27L, FLIP2010-19L and FLIP2010-21L flourished later in these two years. Comparing the two years of experiment, we observed a decrease in number of days for flowering beginning in 23 genotypes, with an average reduction of 8.5 days and 24.2 days in genotypes FLIP2010-32L and 6031, respectively (Table 3). Delayed sowing could have been the responsible for this result in the second year (14 days), since the average temperature of sowing up to flowering beginning were similar in both years (max. 26.4ºC and min. 14.8ºC in 2017; max. 26.6ºC and min. 14.3ºC in 2018).

No significant effect concerning genotypes and year for plant height was noticed (Table 2). Despite this, all genotypes showed a numerical value for plant height above the value obtained by cultivar Silvina (Table 3). Lentil plants can vary from 20 to 75 cm high, depending on the genotype and growing conditions (Saxena, 2009).

In relation to insertion height of the first pod, no significant difference was observed among the genotypes, the lowest numerical value being observed for the cultivar Silvina, 16.82 cm. Lentil plants with pods from 10 to 15 cm high in relation to soil can favor a better phytosanitary state of the seeds and less loss in mechanized harvest (Diekmann & Al-Saleh, 2009). Thus, all the genotypes showed appropriate standard for this trait.

Genotypes FLIP2010-27L, FLIP2010-100L, FLIP2009-19L, FLIP2009-11L, FLIP2010-106L and FLIP2009-1L made up the group with the highest average for the number of pods per plant (Table 3). The longest pods were obtained by cultivar Silvina (14.42 mm), differing statistically from the genotypes. However, in relation to pod width, the genotypes FLIP2010-2L and FLIP 2010-19L (7.27 mm), FLIP2007-11L (7.68 mm) and FLIP2007-16L (7.40 mm) did not differ statistically from cultivar Silvina (7.96 mm). For seed yield per plant, these four genotypes differed statistically from cultivar Silvina, though.

Genotypes FLIP2007-11L, FLIP2010-2L, FLIP2010-19L and cultivar Silvina showed larger seeds, this being different from the others (Table 3). Cultivar Silvina showed the greatest weight of one thousand seeds (53.47 g), followed by genotypes FLIP 2007-16L (52.11 g), FLIP 2010-2L (49.70 g), FLIP 2007-11L (48.63 g), FLIP 2010-8L (48.55 g) and FLIP 2010-12L (43.45 g). The genotype FLIP 2009-15L showed the lowest weight (20.59 g) (Table 3).

In relation to productivity, Silvina is considered one of the most productive cultivar, showing much superior average productivity (2.259 kg ha-1) in relation to worldwide average (1.042 kg ha-1) (Faostat, 2020). Cultivar Silvina and the genotype 6031 showed to be earlier in terms of cycle length; twelve genotypes showed intermediate cycle and 35 genotypes late cycle (Table 3).

Genetic divergence

Considering 21 evaluated morpho-genetic traits, a dendrogram was created (Figure 1) showing the formation of five groups, at 40% similarity level, obtaining an acceptable cophenetic coefficient (0.76). Groups I to III were composed of inbred lines classified as microsperm, showing red coating color of the seed and orangish cotyledon, and groups IV and V by macrosperm genotypes, with green-coated seeds and green and yellow cotyledons.

Figure 1
Dendrogram based on the UPGMA grouping of 48 lentil inbred lines (Lens culinaris) and commercial cultivar Silvina, based on 21 morpho-agronomic traits. Brasília, Embrapa Hortaliças, 2020.

Group I consisted of 18 genotypes, these being most genotypes which showed erect growth habit, average branching intensity, the highest plants, height of the first pod insertion and 1000 seed weight among microsperms. Group II consisted of 25 genotypes, the majority with a semi-erect growth habit, strong branching intensity, medium color intensity of the leaf, the largest variations in leaflet shape considering oval and elliptical, the lowest average number of days until flowering beginning among microsperms, the highest averages for pod length and width, number of seeds per plant, seed yield and width. Group II included the most productive genotype among microsperms (FLIP 2010-99L).

Group III consisted of two genotypes with the smallest seed width among microsperms and the earliest cycle. The average productivity of this group was 410.84 kg ha-1, the highest productivity compared with groups I and II.

The genotype in group IV showed semi-erect growth habit, branching intensity and intensity of the leaf color characterized as strong, seeds coated with green cotyledons.

Group V, composed of three genotypes, showed similarity varying from 35% (FLIP2007-16L in relation to others) to 55% (FLIP2007-11L and FLIP2010-2L), with genotypes showing erect growth habit. Genotypes FLIP2007-11L and cultivar Silvina presented anthocyanin pigmentation in the stems, green-coated seeds, green (FLIP2007-11L and FLIP2010-2L) and yellow (Silvina) cotyledons, the longest and widest pods, the greatest number of seeds per plant, the highest seed yield per plant and the highest productivity. This group also presented the earliest genotype among those of macrosperm type, it means, cultivar Silvina.

Partial coincidence was observed among groups formed by Tocher’s test and by the dendrogram. Six groups were formed by the Tocher’s method (Table 4), and five groups were obtained by cutting the dendrogram (Figure 1). Of the 35 genotypes grouped in the first group by the Tocher’s test, 34 were covered by groups I and II of the dendrogram. Groups II, III and IV of the Tocher’s test were fully contemplated by group II from the dendrogram, except genotype 6031, included in group III from the dendrogram. Genotypes, macrosperm type (FLIP 2010-8L, FLIP 2007-16L, FLIP 2007-11L, FLIP 2010-2L and Silvina), were distributed among groups I, IV and V of the dendrogram; however, they were all gathered in group V by Tocher’s test, except Silvina, who formed an isolated group in this last test.

Table 4
Grouping through Tocher’s method based on the calculated distance by Jaccard’s method among 49 lentil genotypes, 48 experimental inbred lines and the commercial cultivar Sílvina. Brasília, Embrapa Hortaliças, 2020.

Grouping data themselves do not allow to define crosses, as the genetically distinct inbred lines do not necessarily have the best combining ability (Vaz et al., 2017). We should also take into consideration the best averages for traits of interest among the contrasting inbred lines, allowing more frequent combination among superior genotypes (Cruz et al., 2012). Thus, taking into consideration traits such as growing habit, seed coating color, cotyledon color, plant height, number of days until flowering beginning, weight of 1000 seeds and productivity, inbred lines FLIP2010-8L and FLIP2010-12L (group I), FLIP2010-99L, FLIP2010-20L and FLIP2010-106L (group II), FLIP90-25L and 6031 (group III), FLIP2007-16L (group IV) and commercial cultivar Silvina (group V) showed to be more promising to be used in breeding programs of the species.

Genotypes FLIP2010-99L, FLIP2010-20L, FLIP2010-106L and FLIP90-25L showed the best averages for traits of commercial interest within microsperm group. In macrosperm group, cultivar Silvina showed outstandingly high productivity values. As a matter of fact, in this study, no genotype, macrosperm type, was identified as superior to the already existing commercial cultivar. Using the association of grouping techniques with characterization data, we could identify divergent and, at the same time, superior genotypes regarding agronomic traits: FLIP2010-8L and FLIP2010-12L (group I), FLIP2010-99L, FLIP2010-20L and FLIP2010-106L (group II), FLIP90-25L and 6031 (group III), FLIP2007-16L (group IV) and the commercial cultivar Silvina (group V). These genotypes showed potential for being used in breeding programs of the species.

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Publication Dates

  • Publication in this collection
    05 July 2021
  • Date of issue
    Apr-Jun 2021

History

  • Received
    15 July 2020
  • Accepted
    05 Apr 2021
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Associação Brasileira de Horticultura QMSW 06 Lt. 04 Sl. 04, Setor Sudoeste, 70.680-615, Tel. +55 (61) 99621-3780, http://associacaohorticultura.com.br/ - Brasília - DF - Brazil
E-mail: associacaohorticultura@gmail.com
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