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Ethnological aspects of COVID-19

Abstract

Within recent past, coronavirus has shaken the whole world. The world faced a new pandemic of novel coronavirus 2019 (SARS-CoV-2/ COVID-19).It has socioeconomically impacted world population a lot in terms of education, economy as well as physical and mental health. This novel coronavirus is notorious enough that put human health at a great risk. Currently, researchers all over the world aretrying hard to develop a new drug/vaccine for its treatment. In past decades, the world population has faced various viral infectious illness outbreaks. Influenza A, Ebola, Zika, SARS and MERS viruses had whacked public health and economy. Medical science technology achieved the landmark in developing coronavirus (SARS-CoV-2) vaccines that are approved currently for emergency use. Some of the recently approved vaccines are developed by Pfizer and Moderna, Johnson and Johnson, Gam-COVID-vac (Sputnik V), Bharat Biotech (covaxin) andOxford-AstraZeneca vaccines (covishield) (Badenet al., 2021). Here, a short review is drafted focusingon infection, immune system, pathogenesis, phylogenesis, mode of transmission and impact of coronavirus on health and economy and recent developments in treating COVID-19.

Keywords:
Coronavirus; COVID-19; Immune system; MERS; SARS

INTRODUCTION

COVID-19, corona virus, quarantine, lockdown and social distancing; these words are now known to everyone.Viral infection is not a novel term. It is so much popularin public domain that even a layman interprets any infection as a viral infection even without knowing its cause. Viruses are defined as very small (10-250µm), intracellular parasites containing only one type of nucleic acid (RNA/DNA) that can grow only in living cells (like whole organism/fertile eggs/tissue culture etc.) but not in ordinary bacteriologicalculture media and are mostly insensitive to antibiotics (Cooper, Gunn, Carter, 1972Cooper JW, Gunn C, Carter SJ. Cooper and Gunn’s Tutorial Pharmacy. Edited by SJ Carter, Pitman Medical, London. 1972.). This coronavirus belongs to a family of viruses that causes various respiratory symptoms such as pneumonia, fever, breathing difficulty and lung infection. The present outbreak of coronavirusassociated acute respiratory disease called coronavirus disease-19 (COVID-19), is the third documented spillover, after SARS and MERS.Going back to December 2019, a group of patients of an unknown etiology was admitted to hospitals in Wuhan, Hubei Province, People’s Republic of China with early findings of pneumonia. Early five patients suffering from acute respiratory syndrome, later termed as COVID-19, were reported in the month of December 2019 and out of these, one patient died (Lu, Stratton, Tang, 2020Lu H, Stratton CW, Tang YW. Outbreak of Pneumonia of Unknown Etiology in Wuhan China: the Mystery and the Miracle. J Med Virol . 2020;92(4):401-402.). Till 30 Jan-2020, 7734 confirmed cases of COVID-19 were reported in China and 90 cases of COVID-19 were reported from the rest of countries (Wang, Tang, Wei, 2020Wang W, Tang J, Wei F. Updated understanding of the outbreak of 2019 novel coronavirus (2019-nCoV) in Wuhan, China. J Med Virol . 2020;92(4):441-447.). All this raised the eyebrows of rest of the world. On March 11, 2020, WHO(World Health Organization) declared it as a pandemic(Cucinotta, Vanelli, 2020Cucinotta D, Vanelli M. WHO declares COVID-19 a pandemic. Acta Biomed. 2020;91(1):157.). The virus spread mainly due to direct contact or by droplets owing to close contact during coughing, sneezing, and talking. From the laboratory tests it was observed that the signs and symptoms of COVID-19 emerge after a time period of average 5.2 days. The time from the onset of COVID-19 symptoms to death vary from 6-41 days with an average of 14 days (Bassetti, Vena, Giacobbe, 2020Bassetti M, Vena A, Giacobbe DR. The novel Chinese coronavirus (2019-nCoV) infections: Challenges for fighting the storm. Eur J Clin Invest. 2020;50(3):e13209.). Considering its speedy and massive spread the governments of different countries have put the countries in complete lockdown state thereby jamming any movement of persons or goods to prevent the spread of virus or to break the chain of infection.

In order to understand how our immune system work to fight against infection, pathogenicity, transmission of infection and prevention and understanding of spread of diseases specifically covid-19, a brief discussion is dispensed here.

Defence mechanism of our body

The sweat, hair on skin, mucus in nose/throat forms the first line of defence that restricts the entry of any foreign particles in the body. If any foreign particles (virus/bacteria/parasite/allergen/toxicant etc.) got entry into the body and try to threaten the normal homeostasis of the body; an immune response is generated.To combat any mutilation, body’s own immune system reacts against invaded foreign particles (whereas immunity is defined as capacity of the body to resist infection) (Figure 1). The main character of the immune system is white blood cells (WBCs)/leucocytes, containing phagocytes (breakdown pathogens and swallow them) and lymphocytes (memorize previous invaders and discern them if they encounter again). The phagocytes and lymphocytes perform different functions viz. attacking invaders, patrolling for pathogens, removing dead and destroying the infected cells, repairing wounds, destroying compromised cells, producing antibodies or immune-globulins and also alerting other cells involved in defence (Figure 2).Sometimes,natural immunity is not enough for protection against certain diseases, therefore, additional immunity is acquired via passive and active immunization process during life time by administering antigen or antibody containing preparations (Turvey, Broide, 2010Turvey SE, Broide DH. Innate immunity. J Allergy Clin Immunol . 2010;125(2 Suppl 2):S24-S32.; Schroeder, Cavacini, 2010). But as and when a novel infection outbreak occursto which immunity is not acquired then immune system of host cell is compromised and it becomes really important to establish the cause of infection and its control.

FIGURE 1
Different types of immunity.

FIGURE 2
Immune system of human body.

Transmission of infection

Pathogen is a biological agent (bacteria, fungi, protozoa, virus etc.) which causes the damage during the host-microorganism interaction. The capability of pathogen to cause infection is called pathogenicity and microorganisms communicate pathogenicity through their virulence i.e. a quantitative/relative degree of pathogenicity. The microorganisms cause physiological damage and areclassified as obligate, opportunistic and facultative pathogens affecting wide range of living host, specifically immune compromised, and may be able to harass aggressively and progressively (Brooke, 2012Brooke JS. Stenotrophomonas maltophilia: an emerging global opportunistic pathogen. Clin Microbiol Rev. 2012;25(1):2-41.; Casadevall, Pirofski, 2014Casadevall A, Pirofski LA. Microbiology: ditch the term pathogen. Nat News. 2014;516(7530):165.; Casadevall, Pirofski, 2015Casadevall A, Pirofski LA. What is a host? Incorporating the microbiota into the damage-response framework. Infect immun. 2015;83(1):2-7.). Infection spreads by special transferring agents, known as indirect mode of transmission (Figure 3). The animatetransmission mediators/vectors (insects, fleas, mites and rodents), air, water,foodand even the inanimate mediators consisting of fomites (such as toys, clothes bedding and surgical equipments etc.) on which the pathogen deposited are disease carrying vehicles. Indirect pathogentransmission may be spread by air (Bacillusanthraces) or water (Vibrio cholera) etc.(Cortez, Weitz, 2013Cortez MH, Weitz JS. Distinguishing between indirect and direct modes of transmission using epidemiological time series. Am Nat. 2013,181(2):E43-E52.); whereasdirect transmission includesthe diseases transmitted by means of semen, blood and saliva.The direct transmission may occur asleptospirosis (through urine of rats/rodents), faecal-oral infections (through contaminated fingers, food, soil, domesticflies and drinking water) andinfections outspread via direct contact (due to contaminated clothes, hands, domestic flies and other types of infected substances infecting mainly eyes or skin) etc. (Hoglund, 2001Hoglund C. Evaluation of microbial health risks associated with the reuse of source-separated human urine (7th edn). Bioteknologi, Stockholm, Sweden. 2001. p.78.).In COVID-19 the receptor binding by host cells expressed the first step of viral infection followed by fusion with the cell membrane and found that the lung epithelial cells are the prime target of the virus. Hence, it has been observed that human-to-human transmissions of coronavirus take place by the receptor-binding domain of virus spikes and the cellular receptors i.e. angiotensin-converting enzyme -2 receptor (Wan et al., 2020Wan Y, Shang J, Graham R, Baric RS, Li F. Receptor recognition by the novel coronavirus from Wuhan: an analysis based on decade-long structural studies of SARS coronavirus. J Virol. 2020;94(7):e00127-20.).

FIGURE 3
Chain of infection.

Viruses acting on the respiratory tract

“Common cold” and “flu” are the most common ailmentsof the upper respiratory tract caused by viral infection. Of all colds, rhinoviruses,coronaviruses and influenza viruses account for 30-50%, 10-15% and 5-15% of colds; respectively.In the last century, the world has looked over five pandemic viral respiratory disorders. In 1918, Spanish flu (H1N1) killed approximately 50 million, 1957 Asian flu (H2N2) killed about 4 million, Hong Kong flu (H3N2) killed 1 millionpeople worldwide. In 2005 and 2009, Bird flu (H5N1) and Swine flu (H1N1) that affected more birds and pigs and caused around18,000 human deaths. The pandemic originated from the family of coronavirus, usually infect epithelial cells of the gastroenteric or respiratory tract includingSARS and MERS,with symptoms of cough, fever, runny nose, sore throat, difficulty in breathing, dyspnea and hypoxemia (Holmes, Behnke; 1981Holmes KV, Behnke JN. Evolution of a Coronavirus during Persistent Infection inVitro. In Biochemistry and biology of coronaviruses. Springer, Boston, MA;1981. p.287-299.; Eccles, 2005Eccles R. Understanding the symptoms of the common cold and influenza. Lancet Infect Dis. 2005;5(11):718-725.; Huang et al., 2020Huang C, Wang Y, Li X, Ren L, Zhao J, Hu Y, et al. Clinical features of patients infectedwith 2019 novel coronavirus in Wuhan. China. Lancet . 2020;395(10223):497-506.;Boopathi, Poma, Kolandaivel, 2020). Luckily, it has been observed that the SARS patients are not found infectious throughout the incubation period. Several studies showed that SARS-CoV RNA strands mainly found in the plasma of SARS patients, even if it is a respiratory infection. MERS-CoV was the first very much lethal respiratory infectious disease and had high rate of fatality than SARS. The spreading of virus from the blood was rare and the MERS viral load was quite low. In 2020, this novel corona virus disease known as COVID-19 has spread its wings all over the world. A total of 145,426,232coronavirus cases have been reported with 3,087,633deaths, although 123,430,858 cases have been recovered all over world till 23rd April 2021. COVID-19 is unfurling and affecting a large no. of population but alsohave a high recovery rate. The symptoms (Figure 4) appear after some days of incubation period and this period is totally dependent upon the immunity and age of the patient. Other clinical features revealed by chest CT scan were RNAaemia, acute cardiac injury, acute respiratory distress syndrome and occurrence of ground-glass opacities causing death (Wang et al., 2020bWang Z, Chen X, Lu Y, Chen F, Zhang W. Clinical characteristics and therapeutic procedure for four cases with 2019 novel coronavirus pneumonia receiving combined Chinese and Western medicine treatment. Biosci Trends. 2020b;14(1):64-68.; Ren et al., 2020Ren LL, Wang YM, Wu ZQ, Xiang ZC, Guo L, Xu T, et al. Identification of a novel coronavirus causing severe pneumonia in human: a descriptive study. Chin Med J. 2020 (in press); Yang et al., 2020Yang X, Yu Y, Xu J, Shu H, Liu H, Wu Y, et al. Clinical course and outcomes of critically ill patients with SARS-CoV-2 pneumonia in Wuhan, China: a single-centered, retrospective, observational study. Lancet Respir Med. 2020;8(5):475-481.).

FIGURE 4
Common symptoms associated with coronavirus infectionsStructure of coronavirus.

Generally, a virus consists of a central core containing single nucleic acid (RNA/DNA) that is surrounded by a protein shell known as capsid. Some viruses (influenza & measles) are surrounded by a lipid envelope that is very sensitive to ether or alcohol and is fragile enough to be washed off even with soap solution. Occasionally, there are spikes containing haemagglutinin on the surface that may probably assist absorption on to the host cells. Coronavirus is also enveloped virus with spikes on the surface (Figure 5) (Boopathi, Poma, Kolandaivel, 2020).

FIGURE 5
Diagrammatic representation of structure of Coronavirus.

Diversity and classification of coronavirus

Coronavirus is the largest single-stranded RNA virus that belongs to the Nidovirales order. The order includes Roniviridae, Arteriviridae, and Coronaviridae families. The Coronaviridae family is subdivided into Torovirinae and Coronavirinae subfamilies and classified into four genera such as alpha, beta, gamma and delta-CoVs. The alpha and beta-CoVs have ability to infect different human beings whereas the other genera may infect birds and vertebrates. Up to now, seven coronaviruses have been found out that infect humans and leads to respiratory diseases. Four out of seven (HCoV-OC43, HCoV-229E, HCoV-HKU1 and HCoV-NL63.) are ordinary human CoVs (HCoVs) which leads to upper respiratory disease and cause serious illness in young, elderly or immune compromised person (Chen, Liu, Guo, 2020Chen Y, Liu Q, Guo D. Emerging coronaviruses: genome structure, replication, and pathogenesis. J Med Virol. 2020;92(4):418-423.).

Pathogenesis and Phylogenetic of Coronavirus

The person infected with COVID-19 revealed leucopenia (2.91×109 cells/l), abnormal respiratory observations, fever, cough, uncouth breathing sounds of the lungs, high erythrocyte sedimentation rate, elevated body temperature, the high level of plasma cytokines (Lei et al., 2020Lei J, Li J, Li X, Qi X. CT imaging of the 2019 novel coronavirus (2019-nCoV) pneumonia. Radiology. 2020;295(1):18-18.) and also with high blood plasma levels of chemokines and cytokines in infected patients which include IL1-β, IL1RA, IL7, IL8, IL9, IL10, basic FGF2, GCSF, GMCSF, IFNγ, IP10, MCP1, MIP1α, MIP1β, PDGFB, TNFα, and VEGFA. Most of the severe cases which were noted with the high level of pro-inflammatory cytokines such as IL2, IL7, IL10, GCSF, IP10, MCP1, MIP1α, and TNFα and encourage disease severity (Huang et al., 2020Huang C, Wang Y, Li X, Ren L, Zhao J, Hu Y, et al. Clinical features of patients infectedwith 2019 novel coronavirus in Wuhan. China. Lancet . 2020;395(10223):497-506.). The phylogenetic study of COVID-19 patients showed that 99.8 to 99.9% nucleotide genome sequences were identical to new beta-CoVstrain. Another genome sequencing study of COVID-19 patients exhibited 99.98% sequence identity (Luet al., 2020Lu R, Zhao X, Li J, Niu P, Yang B, Wu H, et al.Genomic characterisation and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding. Lancet . 2020;395(10224):565-574.).The genetic sequence study of COVID-19 exhibited approximately 50% to the MERS-CoV and 80% identity to the SARS-CoV, both the infections were (SARS-CoV and MERS-CoV) originated from the bats. Thus, confirming COVID-19 to be a member of the genus beta-coronavirus and infects bats, humans and wild animals.The genetic sequence study and analysis of phylogenetic reports verified that COVID-19 is amply different from SARS-CoV and it considered as a novel beta-coronavirus which mainly cause infections in humans. Furthermore, the virus having single intact open reading frame on gene 8 and this is directly indicator for the bat-origin CoVs. Though, the amino acid sequence and receptor-binding domain of COVID-19 is similar to that of SARS-CoV which indicates that the virus might use the same receptor (Cui, Li, Shi, 2019Cui J, Li F, Shi ZL. Origin and evolution of pathogenic coronaviruses. Nat Rev Microbiol. 2019;17(3):181-192.).

Diagnosis of COVID-19 Infection

The National Health Commission of China gave diagnosis and treatment program for COVID-19 patients based on the recommendations/ guidelines of the WHO on MERS and SARS. According to WHO the final identification test for COVID-19 is confirmed by RT-PCR assay using blood and respiratory samples and studying the viral gene sequencing of the samples which are highly similar with the coronavirus and accordingly patients are classified into low, moderate, severe and serious types (Yang, Yan, 2020Yang W, Yan F. Patients with RT-PCR-confirmed COVID-19 and normal chest CT. Radiology. 2020;295(2):E3-E3.; Siordia, 2020Siordia Jr JA. Epidemiology and clinical features of COVID-19: A review of current literature. J Clin Virol. 2020;127:104357.).The identification testing method consists of two categories i.e. serological and nucleic-acid. The serological tests confirm the antibodies (IgG and IgM) present in the patient’s serum while the nucleic-acid testing method include the probe for RNA of virus swabbed from the throat and nasal passage of the patient. During early stage of infection, the patient viral titres are so much high and a single patient swab nasopharyngeal sample may carry 1 million SARS CoV-2 viralparticles. Thus, nucleic acid tests provide the earliest and sensitive detection of the SARSCOV-2. The RT-PCR analysis test was initiated by the Centre for Disease Control and Prevention 2020 (CDC) and termed as the “gold standard” for clinical identification (Wolfel et al., 2020Wolfel R, Corman VM, Guggemos W, Seilmaier M, Zange S, Muller MA, et al. Virological assessment of hospitalized patients with COVID-2019. Nature . 2020;581(7809):465-469.). The general RT-PCR test includes the three steps that are samplecollection, lysis/RNA purification andamplification from the nasopharyngeal swab sample.The RNA strand of the inactivated virus is purified by using column-based RNA purification kit. The purified and amplified RNA can be detected through Taqman probefluorescence or DNA-intercalating dyes and a threshold cycle of amplification is set to distinguishpositive and negative results. The test result is considered positive if amplification is foundfor two or more viral targets, while the test is negative if amplification is measured for the controlRNA but for none of the viral targets (Shen et al., 2020Shen M, Zhou Y, Ye J, Al-Maskri AA, Kang Y, Zeng S, et al. Recent advances and perspectives of nucleic acid detection for coronavirus. J Pharm Biomed Anal. 2020;10(2):97-101.).

Therapeutics treatment

Upon a viral endemic, knowing the cause (whether the outbreak is caused by a new or a previously known virus) is highly important so as to rapidly establishwhich approachesand actions are most appropriate to detect the genesis, controlits spread and also to curb potential consequences of the outbreak.When there are no specific vaccination and antiviral drugs are available against coronavirus disease for potential treatment of humans then the only alternative is using antiviral drugs (broad spectrum) such as nucleoside analogues and HIV-protease inhibitors which could assuage viral infection until the vaccination and a specific viral drug becomes obtainable (Jinet al., 2020Jin YH, Cai L, Cheng ZS, Cheng H, Deng T, Fan YP, et al. A rapid advice guideline for the diagnosis and treatment of 2019 novel coronavirus (2019-nCoV) infected pneumonia (standard version). Mil Med Res. 2020;7(1):4.). Theoptional treatment of Coronavirus included oral administration of lopinavir (500 mg), oseltamivir (75 mg), ritonavir (500 mg) twice a day and i.v. administration of ganciclovir (0·25 g) for 3 to 14 days.

On the other hand, the broad spectrum anti-viral drug such aschloroquine andremdesivirare very much effective against the control of coronavirus. The CPAM (China International Exchange and Promotive Association for Medical and Health Care) recommends chloroquine, (500 mg) and hydroxychloroquine (400 mg) for older patients and patients with underlying disorders (Wanget al., 2020Wang W, Tang J, Wei F. Updated understanding of the outbreak of 2019 novel coronavirus (2019-nCoV) in Wuhan, China. J Med Virol . 2020;92(4):441-447.). More recently, favipiravir is portrayed as a potential oral medicament for mild to moderate cases of COVID-19. These all anti-viral drugs have been effectively used in patients with a safety record. In addition, several other compounds such as EIDD-2801 compound which have been used against influenza virus and this is the otherpossible drug to be counted for the coronavirus treatment (Toots et al.,2019Toots M, Yoon JJ, Cox RM, Hart M, Sticher ZM, Makhsous N, et al. Characterization of orally efficacious influenza drug with high resistance barrier in ferrets and human airway epithelia. Sci Transl Med. 2019;11(515):eaax5866). In the present circumstances, where COVID-19 is proving to be hazardous to mankind, more and more research is immediatelyrequired to develop novel chemotherapeutic agent for the treatment of COVID-19 infections. Presently, plasma therapy is also showing good results (Koenig, 2015Koenig KL. Identify-Isolate-Inform: A modified tool for initial detection and management of Middle East Respiratory Syndrome patients in the emergency department. West J Emerg Med. 2015;16(5):619.; Mair-Jenkins et al., 2015Mair-Jenkins J, Saavedra-Campos M, Baillie JK, Cleary P, Khaw FM, Lim WS, et al. The effectiveness of convalescent plasma and hyperimmune immunoglobulin for the treatment of severe acute respiratory infections of viral etiology: a systematic review and exploratory meta-analysis. J Infect Dis. 2015;211(1):80-90.). The recombinant monoclonal antibody is a directly onward path to counteractthe viral infection for example CR3022 is a coronavirus human monoclonal antibody which is able to bind the receptor-binding domain of coronavirus (Tian et al., 2020Tian X, Li C, Huang A, Xia S, Lu S, Shi Z, et al. Potent binding of 2019 novel coronavirus spike protein by a SARS coronavirus-specific human monoclonal antibody. Emerg Microbes Infect. 2020;9(1):382-385.).

Vaccine development

The origin of various new strains from zoonotic hosts provides a very complex structure and very tricky to identified them. Previously, the coronavirus were known as a weak pathogen and causing mild flu-like illness but with repeated transmission and consistent outbreaks threaten economic losses globally (Jeyanathan et al., 2020Jeyanathan M, Afkhami S, Smaill F, Miller MS, Lichty BD, Xing Z. Immunological considerations for COVID-19 vaccine strategies. Nat Rev Immunol. 2020;20(10):615-632.). The development of vaccine depends upon the selection of antigen, adjuvant, manufacturing system and the delivery process. The quick development of vaccines is possible only when the structural information and genome sequence of SARS-CoV-2 are available. Different areas were explored for the development of vaccines includes live attenuated vaccines, inactivated virus vaccines, recombinant protein based viral vaccines, subunit vaccine and DNA vaccines (Shereenet al., 2020Shereen MA, Khan S, Kazmi A, Bashir N, Siddique R. COVID-19 infection: Origin, transmission, and characteristics of human coronaviruses. J Adv Res. 2020;24:91-98.) discussed in Table I.

TABLE I
Different types of vaccines, their mechanism of action and development process

Vaccines are critical for the prevention and control of infectious-disease outbreaks. WHO possesses vaccines to prevent more than 20 life-threatening diseases that help people of all ages live longer and healthier lives. Immunization achieved through vaccines prevents 2-3 million deaths every year from diseases like diphtheria, tetanus, pertussis, influenza and measles etc. Various laboratories all around the world are going through different phase trials for the development of vaccine (Table II) to combat the deadly virus.

TABLE II
Coronavirus vaccines which are under clinical trials currently

Impact of COVID-19

The shutdown of financial markets affected the economy brutally in various sectors i.e. education, aviation, hotels, restaurants, tourism, entertainment, manufacturing, sports and IT sectors etc. (Ozili, Arun 2020Ozili PK, Arun T. Spillover of COVID-19: impact on the Global Economy. Available at SSRN 3562570. 2020.). These restrictions cost the tourism sector a loss of $200 billion globally and GTBA reported the loss to the business travel sector would be $820 billion in revenue (Gaiotti, 2013Gaiotti E. Credit availability and investment: Lessons from the “great recession”. Eur Eco Rev. 2013;59:212-227.).Shutdown of hotels in the United States, UK and in various Asian and European countries leads to the approximated 24.3 million losses of jobs globally, and 3.9 million losses in the US only.Oil-dependent countries encountered loss in oil revenue. In Italy, loss of 7.3 million Euros in film screening, 7.2 million Euros in theatre segment, and 4.1million Euros in the live music sector, 2.5 million Euros in the dance activities and 1.8 million Euros in the exhibition sector was estimated from February 23 to March 1, 2020 (Jagannathan, Kapoor, Schaumburg, 2013Jagannathan R, Kapoor M, Schaumburg E. Causes of the great recession of 2007-2009: The financial crisis was the symptom not the disease. J Financ Intermed. 2013;22(1):4-29.). UNESCO reported that the pandemic disturbed the education at least 290.5 million students globally. According to S&P Dow Jones, $6 trillion amount lost from 23-28 Feb, 20. From 20 Feb 2020 to 19 Mar 2020, the S&P 500 index fell by 28%, the FTSE 250 index fell by 41.3% and the Nikkei fell by 29% in the same time, large international banks recorded a fall in their share price (Ozili, 2019). In health Sector, China supplied about 60% of world’s active pharmaceutical ingredients and during this shutdown severe supply issues are used as maximum pharma companies procure raw material from china that leads to shortage of drugs even for other diseases amid the crisis of COVID-19 (Allen, Carletti, 2010Allen F, Carletti E. An overview of the crisis: Causes, consequences, and solutions. Int Rev Finance. 2010;10(1):1-26.).

Recent mutation of COVID-19

Currently, the scientists are trying to produce vaccines against SARS-CoV-2 globally. The protein-based type vaccines are more effective and the private based sectors are also focus on the development of this type of vaccines. But, unexpectedly the mutation speed of Coronaviridae (SARS-CoV-2) is reminding high and may be implicated the efficiency of therapeutic agents and vaccines. Moreover, the newest strain of SARS-CoV-2 lineage emerged mainly in UK, South Africa and Brazil and this may enhance the number of the patients of COVID-19 in those countries. Scientists have expressed that the mutations occurred in the virus genome world-wide and reported that the new SARS-CoV-2 variant proposed by the alteration of nucleotide genome sequence (Nidomet al., 2021Nidom RV, Indrasari S, Normalina I, Nidom AN, Afifah B, Dewi L, et al. An updated investigation prior to COVID-19 Vaccination Program in Indonesia: Full-length genome mutation analysis of SARS-CoV-2. bioRxiv. 2021.). Formerly, Phan et al.,(2020Phan T. Genetic diversity and evolution of SARS-CoV-2. Infect Genet Evol. 2020;81:104260.)carried out a genetic analysis on 86 virus genomes and accounted many mutations. In the meantime, Yadav et al., (2020Yadav PD, Potdar VA, Choudhary ML, Nyayanit DA, Agrawal M, Jadhav SM, et al. Full-genome sequences of the first two SARS-CoV-2 viruses from India. Indian J Med Res. 2020;151(2-3):200.) also analyzed the first two viruses which were isolated from India. The mutation frequency is found to be moderate in coronavirus. Some of the factors such as host and environmental factors which are mainly involves in the mutational events of SARS-CoV-2. Alteration at S protein could modify the pathogenesis of the virus and initiate the unambiguous host immune responses. Furthermore, the environmental factors like UV radiation, high temperature and humidity play a major role in the mutation of viruses. Some of the current studies suggest that the coronavirus variation arises at the point N501Y of the spike protein and engross 23 separate mutations on the spike protein out of which 17 are connected to the virus proteins and therefore offer specific features to the virus. The variants recently described in the UK will not hinder vaccine-induced immunity and will not break the vaccine although there may be chance of making it less effective (Tegallyet al., 2020Tegally H, Wilkinson E, Giovanetti M, Iranzadeh A, Fonseca V, Giandhari J, et al. Emergence and rapid spread of a new severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) lineage with multiple spike mutations in South Africa. medRxiv. 2020).

Currently approved vaccines

It is nothing short of a medical surprise that vaccines have been produced for Coronavirus in the same year as the universal pandemic - itself. Due to an extraordinary achievement in medical science technology vaccines for coronavirus (SARS-CoV-2) are approved currently for emergency use. Some of the recently approved vaccines are developed by Pfizer and Moderna, Johnson and Johnson, Gam-COVID-vac (Sputnik V), Bharat Biotech (covaxin) and Oxford-AstraZeneca vaccines (covishield) (Badenet al., 2021Baden LR, El Sahly HM, Essink B, Kotloff K, Frey S, Novak R, et al. Efficacy and safety of the mRNA-1273 SARS-CoV-2 vaccine. N Engl J Med. 2021;384(5):403-416.). The Pfizer and Moderna developed vaccines based on mRNA technology as well as lipid nanoparticles delivery system whereas the Johnson and Johnson, AstraZeneca and Gam-COVID-vac are based upon the DNA carrying non-replicating recombinant adenovirus (AdV) vector systems. The mRNA and AdV vaccines developed for SARS-CoV-2 primarily work to neutralize antibodies generated via natural infection and for therapeutic use based on monoclonal antibodies (Polack et al., 2020Polack FP, Thomas SJ, Kitchin N, Absalon J, Gurtman A, Lockhart S, et al. Safety and efficacy of the BNT162b2 mRNA Covid-19 vaccine. N Eng J Med. 2020;383(27):2603-2615.). The phase III clinical trials study showed that the Pfizer/BioNTech and Moderna mRNA vaccines have 90-95% efficacy in protecting against coronavirus whereas the AdV vaccines and Gam-COVID-vac (Sputnik V) showed 92% efficacy (Voysey et al., 2021Voysey M, Clemens SAC, Madhi SA, Weckx LY, Folegatti PM, Aley PK, et al. Safety and efficacy of the ChAdOx1 nCoV-19 vaccine (AZD1222) against SARS-CoV-2: an interim analysis of four randomised controlled trials in Brazil, South Africa, and the UK. Lancet . 2021;397(10269):99-111.). The mRNA based vaccine platform represents anoriginally new licensed formulationalthough the AdV vaccine platform has been licensed for Ebola (Logunov et al., 2021Logunov DY, Dolzhikova IV, Shcheblyakov DV, Tukhvatulin AI, Zubkova OV, Dzharullaeva AS, et al. Safety and efficacy of an rAd26 and rAd5 vector-based heterologous prime-boost COVID-19 vaccine: an interim analysis of a randomised controlled phase 3 trial in Russia. Lancet . 2021;397(10275):671-681.). But, we still have much more to learn about how these vaccines mobilize the immune systems and increase the durability of protection and how to furthermore optimize them to prevent against new strains, variants and disease manifestations.

CONCLUSION

This novel coronavirus eruption has challenged the public health, medical, world economic and other necessary activities of the whole world. COVID-19has had a detrimental effect on global healthcare systems rippling to other sectors alsoincluding tourism, petroleum, aviation, e-commerce, sports, entertainment and IT sector etc. Some of the vaccines got approval for the treatment of coronavirus infection. To break the chain of infection, washing hands with soap for 30 sec and alcohol based sanitizers, wearing masks at public places, physical distancing and following the prevention protocols and advisories issued from various health organizations is quite enough to keep the virus at bay. The coronavirus pandemic caused a major reshuffle which includes public health emergency, economic shutdown and social isolation as well as physical distancing. This pandemic has critically affected many practices of consumption or socializing between individuals. Some of the foremost changes in terms of volume, content and procedures took place in these domains of practices. Moreover, social isolation and economic shutdown coupled by physical distancing policies has blocked the performance of both the activities. Likewise, stay-at-home significantly reduced social communication and inter-personal interactions. The pandemic may show a two wave or three wave pattern that too with unpredicted degree of severity. In future government launch some advance programmes like case investigation and tracing programmes which helps to tackle public health equity and advance community resilience. Thus, apart from fighting back this outbreak, lots of efforts are needed for the prevention of future outbreaks of zoonotic origin.

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  • FUNDING

    There is no direct or indirect financial interest and funding.
  • ETHICAL APPROVAL

    No human or animal studies are performed in this study.

Publication Dates

  • Publication in this collection
    19 Dec 2022
  • Date of issue
    2022

History

  • Received
    18 Nov 2020
  • Accepted
    12 May 2021
Universidade de São Paulo, Faculdade de Ciências Farmacêuticas Av. Prof. Lineu Prestes, n. 580, 05508-000 S. Paulo/SP Brasil, Tel.: (55 11) 3091-3824 - São Paulo - SP - Brazil
E-mail: bjps@usp.br