1 |
RM122 (xa5)
|
5 |
F: GAGTCGATGTAATGTCATCAGTGC |
Shanti et al. (2010)SHANTI, M.L., SHENOY, V.V., LALITHA, D.G., MOHAN, K.V., PREMALATHA, P., NAVEEN, K.G., SHASHIDHAR, H.E., ZEHR, U.B. and FREEMAN, W.H., 2010. Marker-assisted breeding for resistance to bacterial leaf blight in popular cultivar and parental lines of hybrid rice. Journal of Plant Pathology, vol. 1, no. 3, pp. 495-501. http://dx.doi.org/10.4454/jpp.v92i2.194. http://dx.doi.org/10.4454/jpp.v92i2.194...
|
R: GAAGGAGGTATCGCTTTGTTGGAC |
2 |
RM21 (xa5)
|
11 |
F:ACAGTATTCCGTAGGCACGG |
Pha and Lan (2004)PHA, N.T. and LAN, N.T., 2004. Marker assisted selection in rice breeding for bacterial leaf blight. Omon Rice, vol. 12, pp. 19-26.
|
R:GCTCCATGAGGGTGGTAGAG |
3 |
RM206 (xa10)
|
11 |
F:CCCATGCGTTTAACTATTCT |
Chen et al. (1997)CHEN, S., TEMNYKH, S., XU, Y., CHO, Y.G. and MCCOUCH, S.R., 1997. Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.). Theoretical and Applied Genetics, vol. 95, no. 4, pp. 553-567. http://dx.doi.org/10.1007/s001220050596. http://dx.doi.org/10.1007/s001220050596...
|
R:CGTTCCATCGATCCGTATGG |
4 |
RM159 (xa5)
|
5 |
F:GGGGCACTGGCAAGGGTGAAGG |
Pinta et al. (2013)PINTA, W., TOOJINDA, T., THUMMABENJAPONE, P. and SANITCHON, J., 2013. Pyramiding of blast and bacterial leaf blight resistance genes into rice cultivar RD6 using marker assisted selection. African Journal of Biotechnology, vol. 12, no. 28, pp. 4432-4438. http://dx.doi.org/10.5897/AJB12.2028. http://dx.doi.org/10.5897/AJB12.2028...
|
R:GCTTGTGCTTCTCTCTCTCTCTCTCTCTC |
5 |
xa13 promoter (xa13)
|
8 |
F:TCCCAGAAAGCTACTACAGC |
Hajira et al. (2016)HAJIRA, S.K., SUNDARAM, R.M., LAHA, G.S., YUGANDER, A., BALACHANDRAN, S.M., VIRAKTAMATH, B.C., SUJATHA, K., BALACHIRANJEEVI, C.H., PRANATHI, K., ANILA, M., BHASKAR, S., ABHILASH, V., MAHADEVASWAMY, H.K., KOUSIK, M., KUMAR, T.D., HARIKA, G. and REKHA, G., 2016. A single-tube, functional markerbased multiplex PCR assay for simultaneous detection of major bacterial blight resistance genes xa21, xa13 and xa5 in Rice. Rice Science, vol. 23, no. 3, pp. 144-151. http://dx.doi.org/10.1016/j.rsci.2015.11.004. http://dx.doi.org/10.1016/j.rsci.2015.11...
|
R:GCAGACTCCAGTTTGACTTC |
6 |
RM224 (xa4)
|
11 |
F: ATCGATCGATCTTCACGAGG |
Chen et al. (1997)CHEN, S., TEMNYKH, S., XU, Y., CHO, Y.G. and MCCOUCH, S.R., 1997. Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.). Theoretical and Applied Genetics, vol. 95, no. 4, pp. 553-567. http://dx.doi.org/10.1007/s001220050596. http://dx.doi.org/10.1007/s001220050596...
|
R: TGCTATAAAAGGCATTCGGG |
7 |
pTA 248 (xa21)
|
11 |
F:AGACGCGGGAAGGGTGGTTCCCGGA |
Davierwala et al. (2001)DAVIERWALA, A.P., REDDY, A.P.K., LAGU, M.D., RANJEKAR, P.K. and GUPTA, V.S., 2001. Marker assisted selection of bacterial blight resistance genes in rice. Biochemical Genetics, vol. 39, no. 7-8, pp. 261-278. http://dx.doi.org/10.1023/A:1010282732444. PMid:11590832. http://dx.doi.org/10.1023/A:101028273244...
|
R:AGACGCGGGTAATCGAAAGATGAAA |
8 |
RM251 (xa7/8)
|
3 |
F: GAATGGCAATGGCGCTAG |
Chen et al. (1997)CHEN, S., TEMNYKH, S., XU, Y., CHO, Y.G. and MCCOUCH, S.R., 1997. Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.). Theoretical and Applied Genetics, vol. 95, no. 4, pp. 553-567. http://dx.doi.org/10.1007/s001220050596. http://dx.doi.org/10.1007/s001220050596...
|
R: ATGCGGTTCAAGATTCGATC |
9 |
RM317 (xa2)
|
4 |
F:CATACTTACCAGTTCACCGCC |
He et al. (2006)HE, Q., LI, D.B., ZHU, Y.S., TAN, M.P., ZHANG, D.P. and LIN, X.H., 2006. Fine mapping of Xa2, a bacterial blight resistance gene in rice. Molecular Breeding, vol. 17, no. 1, pp. 1-6. http://dx.doi.org/10.1007/s11032-005-8698-2. http://dx.doi.org/10.1007/s11032-005-869...
|
R:CTGGAGAGTGTCAGCTAGTTGA |
10 |
RM13 (xa5)
|
5 |
F:TCCAACATGGCAAGAGAGAG |
McCouch et al. (1988)MCCOUCH, S.R., KOCHERT, G., YU, Z.H., WANG, Z.Y., KHUSH, G.S., COFFMAN, W.R. and TANKSLEY, S.D., 1988. Molecular mapping of rice chromosomes. Theoretical and Applied Genetics, vol. 76, no. 6, pp. 815-829. http://dx.doi.org/10.1007/BF00273666. PMid:24232389. http://dx.doi.org/10.1007/BF00273666...
|
R:GGTGGCATTCGATTCCAG |
11 |
RM167 (xa3/4) |
11 |
F:GATCCAGCGTGAGGAACACGT |
Wu and Tanksley (1993)WU, K.S. and TANKSLEY, S.D., 1993. Abundance, polymorphism and genetic mapping of microsatellites in rice. Molecular & General Genetics : MGG, vol. 241, no. 1-2, pp. 225-235. http://dx.doi.org/10.1007/BF00280220. PMid:7901751. http://dx.doi.org/10.1007/BF00280220...
|
R:AGTCCGACCACAAGGTGCGTTGTC |
12 |
RM230 (xa13)
|
8 |
F:GCCAGACCGTGGATGTTC |
Chen et al. (1997)CHEN, S., TEMNYKH, S., XU, Y., CHO, Y.G. and MCCOUCH, S.R., 1997. Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.). Theoretical and Applied Genetics, vol. 95, no. 4, pp. 553-567. http://dx.doi.org/10.1007/s001220050596. http://dx.doi.org/10.1007/s001220050596...
|
R:CACCGCAGTCACTTTTCAAG |
13 |
RM347 (xa11)
|
3 |
F: CACCTCAAACTTTTAACCGCAC |
Goto et al. (2009)GOTO, T., MATSUMOTO, T., FURUYA, N., TSUCHIYA, K. and YOSHIMURA, A., 2009. Mapping of bacterial blight resistance gene xa11 on rice chromosome 3. Japan Agricultural Research Quarterly, vol. 43, no. 3, pp. 221-225. http://dx.doi.org/10.6090/jarq.43.221. http://dx.doi.org/10.6090/jarq.43.221...
|
R: TCCGGCAAGGGATACGGCGG |
14 |
RM263 (xa8)
|
2 |
F: CCCAGGCTAGCTCATGAACC |
Chen et al. (1997)CHEN, S., TEMNYKH, S., XU, Y., CHO, Y.G. and MCCOUCH, S.R., 1997. Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.). Theoretical and Applied Genetics, vol. 95, no. 4, pp. 553-567. http://dx.doi.org/10.1007/s001220050596. http://dx.doi.org/10.1007/s001220050596...
|
R:GCTACGTTTGAGCTACCACG |