A matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometer has been built with the capabilities to perform structural analyzes. The first time-of-flight mass spectrometer includes a timing ion gate to select the ions to be analyzed. After the selection process, the ions are activated using an electrically floating collision cell. The fragments produced in the collision cell are analyzed in the second time-of-flight stage. A two-step mass calibration procedure is introduced that allows one to obtain accurate mass values. The characteristics of this calibration procedure make possible to automate it. The experimental results of the tandem mass spectrometer and calibration procedure using different standard peptides are presented.
Tadem mass spectrometry; Time-of-flight; TOF/TOF; MS/MS; MALDI; Automation; Mass calibration
