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Genetic diversity in okra using RAPD markers

RAPD markers were utilized to estimate the diversity among 42 Abelmoschus and 1 Hibiscus accessions . The genetic distances were based on the arithmetic complement of the Jaccard index. For this purpose we used the multivariate analysis technique by hierarchycal single linkage and the Tocher methods to obtain the genotypes agglomeration as well as to analyze the methods employed. Thirty-one random decamer primers were used do amplify DNA by the polymerase chain reaction (PCR) and 103 RAPD fragments were generated. The hierarchycal method of single linkage has separated 43 genotypes, in a general way, according to the botanical species, forming six different groups. The genetic distances projection on the bidimentional level confirmed that the first and largest group has united A.esculentus and A. caillei accessions.On the other hand, the Tocher method grouped 90% of the germoplasm at group I, including A. moschatus and A. manihot accessions, besides the other two previous species. The Tocher optimization method allowed the formation of just 4 genotype groups. There was only partial coherence to the hierarchycal grouping analysis. The Tocher group I accessions regrouping by the hierarchycal method revealed the existence of a most important genetic heterogenity on the studied germplasm.

Abelmoscus esculentus; multivariate analysis; genetics distances; genetics resources


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