30-years of conventional tillage (C) and no-tillage (S) management |
Fusarium graminearum
|
Bacteria:Chitinophagaceae, Acidobacteriaceae, Microbacterium , and Burkholderiaceae
|
Campos et al. (2016)Campos SB, Lisboa BB, Camargo FAO, Bayer C, Sczyrba A, Dirksen P, Albersmeier A, Kalinowski J, Beneduzi A, Costa PB, Passaglia LMP, Vargas LK, Wendisch VF. Soil suppressiveness and its relations with the microbial community in a Brazilian subtropical agroecosystem under different management systems. Soil Biol Biochem. 2016;96:191-7. https://doi.org/10.1016/j.soilbio.2016.02.010 https://doi.org/10.1016/j.soilbio.2016.0...
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3-year (C) and 15-year (S) monoculture of strawberry |
Fusarium oxysporum S4-7 |
Bacteria: Actinobacteria, Proteobacteria, Acidobacteria, Nitrospirae and Gemmatimonadetes. |
Cha et al. (2016)Cha J-Y, Han S, Hong H-J, Cho H, Kim D, Kwon Y, Kwon S-K, Crüsemann M, Lee YB, Kim JF, Giaever G, Nislow C, Moore BS, Thomashow LS, Weller DM, Kwak Y-S. Microbial and biochemical basis of a Fusarium wilt-suppressive soil. ISME J. 2016;10:119-29. https://doi.org/10.1038/ismej.2015.95 https://doi.org/10.1038/ismej.2015.95...
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Fallow field for several (S) and few (C) years |
Fusarium wilt |
Fungy:Acremonium, Chaetomium, Cladosporium, Clonostachys, Fusarium, Ceratobasidium, Mortierella, Penicillium, Scytalidium, and Verticillium Bacteria: Adhaeribacter, Massilia, Microvirga, Rhizobium, Geobacter, Rhizobacter, Arthrobacter, Amycolatopsis, Rubrobacter, Paenibacillus, and Stenotrophomonas
|
Siegel-Hertz et al. (2018)Siegel-Hertz K, Edel-Hermann V, Chapelle E, Terrat S, Raaijmakers JM, Steinberg C. Comparative microbiome analysis of a Fusarium wilt suppressive soil and a Fusarium wilt conducive soil from the Chateaurenard region. Front Microbiol. 2018;9:568. https://doi.org/10.3389/fmicb.2018.00568 https://doi.org/10.3389/fmicb.2018.00568...
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(S and C) Vanilla long-term continuous cropping with similar soil characteristics. |
Fusarium wilt |
Fungy: Zygomycota and Basidiomycota Bacteria: Acidobacteria, Verrucomicrobia, Actinobacteria and Firmicutes |
Xiong et al. (2017)Xiong W, Li R, Ren Y, Liu C, Zhao Q, Wu H, Jousset A, Shen Q. Distinct roles for soil fungal and bacterial communities associated with the suppression of vanilla Fusarium wilt disease. Soil Biol Biochem. 2017;107:198-207. https://doi.org/10.1016/j.soilbio.2017.01.010 https://doi.org/10.1016/j.soilbio.2017.0...
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(S) tillage and no-tillage soybean; (C) formaldehyde treated soil |
Heterodera glycines
|
Fungy:Helotiales , unclassified Orbiliomycetes, Chaetothyriales , and unclassified Ascomycota Bacteria: Pseudomonadales and Enterobacteriales
|
Hu et al. (2017)Hu W, Samac DA, Liu X, Chen S. Microbial communities in the cysts of soybean cyst nematode affected by tillage and biocide in a suppressive soil. App Soil Ecol. 2017;119:396-406. https://doi.org/10.1016/j.apsoil.2017.07.018 https://doi.org/10.1016/j.apsoil.2017.07...
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(S and C) Tobacco field |
Ralstonia spp. |
Bacteria: Acidobacteria, BRC1, Crenarchaeota, Euryarchaeota, Ignavibacteriae, Latescibacteria, Pacearchaeota, Synergistetes, and Woesearchaeota |
Yang et al. (2017)Yang H, Li J, Xiao Y, Gu Y, Liu H, Liang Y, Liu X, Hu J, Meng D, Yin H. An integrated insight into the relationship between soil microbial community and tobacco bacterial wilt disease. Front Microbiol. 2017;8:2179. https://doi.org/10.3389/fmicb.2017.02179 https://doi.org/10.3389/fmicb.2017.02179...
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(S and C) Crop producing agroecosystems |
Fusarium oxysporum
|
Bacteria: Actinobacteria, Firmicutes and Acidobacteria |
Trivedi et al. (2017)Trivedi P, Delgado-Baquerizo M, Trivedi C, Hamonts K, Anderson IC, Singh BK. Keystone microbial taxa regulate the invasion of a fungal pathogen in agro-ecosystems. Soil Biol Biochem. 2017;111:10-4. https://doi.org/10.1016/j.soilbio.2017.03.013 https://doi.org/10.1016/j.soilbio.2017.0...
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(S and C) Banana orchards |
Fusarium wilt |
Bacteria:Chthonomonas , putative genera named Gp4 and Gp5, Pseudomonas , and Tumebacillus
|
Shen et al. (2015) |
(S and C) Tobacco field |
Ralstonia solanacearum
|
Fungy: Ascomycota Bacteria: Firmicutes |
Zeng et al. (2021) |