Chiggers |
18S |
18S–1R: ATATTGGAGGGCAAGTCTGG |
~650-bp |
Otto and Wilson (2001) Otto JC, Wilson KJ. Assessment of the usefulness of ribosomal 18S and mitochondrial COI sequences in Prostigmata phylogeny. In: Proctor HC, Norton RA, Colloff MJ, editors. Acarology: Proceedings of the 10th International Congress. Melbourne: CSIRO Publishing; 2001. p. 100-109.
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18S-1R: TGGCATCGTTTATGGTTAG |
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COI-1 |
CI-J-175I: GGWGCWCCWGAYATRGCWTTYCC |
950-bp |
Simon et al. (1994) Simon C, Frati F, Beckenbach A, Crespi B, Liu H, Flook P. Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Ann Entomol Soc Am 1994; 87(6): 651-701. http://dx.doi.org/10.1093/aesa/87.6.651. http://dx.doi.org/10.1093/aesa/87.6.651...
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CI-N-219I: GGWARAATTAAAATATAWACTTC |
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772: TGATTTTTTGGTCACCCAGAAG |
408-bp |
Navajas et al. (1994) Navajas M, Gutierrez J, Bonato O, Bolland HR, Mapangou-Divassa S. Intraspecific diversity of the cassava green mite Mononychellus progressivus (Acari: Tetranychidae) using comparisons of mitochondrial and nuclear ribosomal DNA sequences and cross breeding. Exp Appl Acarol 1994; 18(6): 351-360. http://dx.doi.org/10.1007/BF00116316. PMid:7628252. http://dx.doi.org/10.1007/BF00116316 ...
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773: TACAGCTCCTATAGATAAAAC |
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Rickettsia spp. |
gltA
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CS 78 F: GCAAGTATCGGTGAGGATGTAAT |
401-bp |
Labruna et al. (2004) Labruna MB, Whitworth T, Horta MC, Bouyer DH, McBride JW, Pinter A, et al. Rickettsia species infecting Amblyomma cooperi ticks from an area in the state of São Paulo, Brazil, where Brazilian spotted fever is endemic. J Clin Microbiol 2004; 42(1): 90-98. http://dx.doi.org/10.1128/JCM.42.1.90-98.2004. PMid:14715737. http://dx.doi.org/10.1128/JCM.42.1.90-9...
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CS 323 R: GCTTCCTTAAAATTCAATAAATCAGGAT |
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CS-239 F: GCTCTTCTCATCCTATGGCTATTAT |
830-pb |
Labruna et al. (2004) Labruna MB, Whitworth T, Horta MC, Bouyer DH, McBride JW, Pinter A, et al. Rickettsia species infecting Amblyomma cooperi ticks from an area in the state of São Paulo, Brazil, where Brazilian spotted fever is endemic. J Clin Microbiol 2004; 42(1): 90-98. http://dx.doi.org/10.1128/JCM.42.1.90-98.2004. PMid:14715737. http://dx.doi.org/10.1128/JCM.42.1.90-9...
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CS-1069 R: CAGGGTCTTCGTGCATTTCTT |
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ompA
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Rr 190.70 F: ATGGCGAATATTTCTCCAAAA |
532-bp |
Regnery et al. (1991) Regnery RL, Spruill CL, Plikaytis BD. Genotypic identification of rickettsiae and estimation of intraspecies sequence divergence for portions of two rickettsial genes. J Bacteriol 1991; 173(5): 1576-1589. http://dx.doi.org/10.1128/jb.173.5.1576-1589.1991. PMid:1671856. http://dx.doi.org/10.1128/jb.173.5.1576...
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Rr 190.701 R: GTTCCGTTAATGGCAGCATCT |
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ompB
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120.M59 F: CCGCAGGGTTGGTAACTGC |
862-bp |
Roux and Raoult (2000) Roux V, Raoult D. Phylogenetic analysis of members of the genus Rickettsia using the gene encoding the outer-membrane protein rOmpB (ompB). Int J Syst Evol Microbiol 2000; 50(Pt 4): 1449-1455. http://dx.doi.org/10.1099/00207713-50-4-1449. PMid:10939649. http://dx.doi.org/10.1099/00207713-50-4...
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120-807 R: CCTTTTAGATTACCGCCTAA |
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