Open-access High molecular prevalence of HPV and other sexually transmitted infections in a population of asymptomatic women who work or study at a Brazilian university

ABSTRACT

Sexually transmitted infections (STIs) represent a global health problem with variable prevalence depending on the geographical region and the type of population. Human papillomavirus (HPV) encompasses widespread virus types related to cervical carcinogenesis. The present study investigated the molecular prevalence of HPV and seven other important STIs in asymptomatic women working or studying at a Brazilian university. A secondary aim was to assess cytological abnormalities associated with HPV and other STIs coinfections. We recruited 210 women from a Brazilian university. HPV was detected using a single-round polymerase chain reaction (sPCR) followed by a viral genotyping by restriction fragment length polymorphism (RFLP-PCR). The presence of seven STIs: Chlamydia trachomatis, Neisseria gonorrhoeae, Treponema pallidum, Trichomonas vaginalis, Mycoplasma genitalium, herpes simplex virus (HSV)-1 and HSV-2 was detected by multiplex PCR (M-PCR). Furthermore, cytological findings and epidemiological characteristics were evaluated.The mean age of the participants was 27.1 years old. HPV prevalence was 33.8%, and HPV16 was the most frequently detected papillomavirus genotype. Moreover, multiple HPV infections were common (42.2%). We detected at least one STI agent in 11.4% of the tested women, most frequently C. trachomatis (6.7%). Among HPV-positive women, 14.1% were coinfected with other STI agents. Cytological abnormalities were observed in 9.5% of smears, and HPV-DNA, high-risk HPV (HR-HPV), HPV16 and HPV multiple infections were associated with abnormal cytological findings. There was a high prevalence of HPV, and C. trachomatis was the most prevalent STI agent, with low rates of cytological abnormalities. These findings highlight the need of timely STI diagnosis in young asymptomatic women and of a public policy design for STI prevention.

Sexually transmitted infections; Papillomavirus infections; Uterine cervical neoplasms; Screening; Polymerase chain reaction

INTRODUCTION

Sexually transmitted infections (STIs) represent a great global health problem directly impacting women’s sexual and reproductive health. More than one million individuals are infected daily by a STI worldwide, and approximately 300 million people have acquired one of the four curable STIs, Chlamydia trachomatis (C. trachomatis), Neisseria gonorrhoeae (N. gonorrhoeae), Treponema pallidum (T. pallidum), and Trichomonas vaginalis (T. vaginalis). The incidence of viral STIs is also high; every year an estimated over 290 million individuals experience infections caused by human papillomavirus (HPV) worldwide1. The majority of infections caused by sexually curable agents are asymptomatic and treatable; however, when untreated or treated incorrectly, they can lead to severe health complications, particularly in women, such as infertility, pelvic inflammatory disease, ectopic pregnancy1,2, and an increased risk of human immunodeficiency virus (HIV) infection1,3. Therefore, it is urgent that the public health community make effective interventions for STI prevention, screening, diagnosis, and treatment available4.

Cervical cancer (CC) is the fourth most common neoplasm regarding the incidence and mortality in women worldwide5. HPV is necessary, but not sufficient for cervical carcinogenesis. Many factors may be associated with high-risk HPV (HR-HPV) and play an important role in viral persistence, contributing to cancer development6,7. Cofactors associated with the individual’s behaviours include the age at the first intercourse, multiple sexual partners, host genetic variability, and use of tobacco and oral contraceptives7-9. Furthermore, coinfection with bacterial vaginosis10 and other STIs may be associated with increased risk of high-grade squamous intraepithelial cervical lesions (HSIL) and squamous cervical cancer (SCC)11,12.

STIs prevalence in women has been extensively investigated and presents with variable rates depending on the study population and the diagnostic methods employed11-13. However, prevalence studies on asymptomatic non-HPV STIs are scarce in university populations, as are investigations of HPV-related coinfections.

The present study investigated the prevalence of HPV and seven other important STIs in asymptomatic women from a Parana State university, in Brazil. A secondary objective was to assess cytological abnormalities associated with HPV and other STIs coinfections. We detected a high prevalence of HPV and STIs, especially of C. trachomatis accompanied by low rates of cytological abnormalities, highlighting the need to adopt public policies for the prevention and early diagnosis of STIs in young and asymptomatic women.

MATERIALS AND METHODS

Study population

In this transversal study, 210 women aged 18-50 years old were recruited by convenience between August 2014 and November 2015. All participants had already had a sexual intercourse, lived in Maringa city, Parana State, Brazil, and were students or employees of the State University of Maringa (UEM), Parana State, Brazil.

Any of the following factors were considered exclusion criteria: pregnancy, postpartum period, previous hysterectomy, vaginal bleeding, previous history of cancer, no history of sexual activity, recent treatment for any pathology of the urogenital tract, ablative or excisional therapy to the cervix within the previous 12 months, and no observation and/ or sample collection of squamous columnar junction (SCJ).

All participants voluntarily provided a sample for the Papanicolaou (Pap) screening and HPV-DNA detection and non-HPV STIs detection; furthermore, all participants gave their written informed consent before the enrolment. The study was approved by the Committee for Ethics in Research Involving Humans of the State University of Maringa, UEM, Brazil (CAAE 30838314.9.0000.0104; permission 687.955/2014).

Study procedures

The participants answered a questionnaire on demographic characteristics, lifestyle and sexual behaviour. The information included age, self-declared skin color, marital status, childbirth, number of sexual partners during the lifespan, age of first intercourse, smoking habit, oral contraceptive use, and cervical cauterization.

Vaginal, cervical and endocervical samples were collected by the Ayres’s spatula and a cytobrush for the Pap smear preparation. Cytological smears were stained using the Papanicolaou technique and evaluated by a cytopathologist according to the Bethesda System diagnostic criteria14. The cytological findings were classified as negative for squamous intraepithelial lesion or malignancy (NILM), atypical squamous cells of undetermined significance (ASC-US) or could not exclude squamous intraepithelial lesions of high-grade (ASC-H), low-grade squamous intraepithelial lesions (LSIL), high-grade squamous intraepithelial lesions (HSIL) and invasive cervical cancer (CC). The follow-up of positive patients (ASC-US or more severe cytologic changes) were carried out according to the Brazilian guidelines for CC screening15.

For molecular procedures, samples were immediately suspended in 1.0 mL of sterile 0.9% NaCl2 solution and stored at - 80 º C until analysis.

Genomic DNA extraction

Samples were incubated for 15 min with proteinase K in phosphate-buffered saline and then centrifuged for 30 s at 6,800 g. DNA extraction was performed with the Purelink viral RNA/ DNA® kit (Invitrogen, Thermo Fisher Scientific, Waltham, MA, USA) according to the manufacturer’s instructions. The quality and quantity of purified DNA were evaluated using a spectrophotometer (NanoDrop 2000 Spectrophotometer, Thermo Fisher Scientific, Waltham, MA, USA).

Single-round PCR (sPCR) for HPV detection and HPV genotyping by restriction fragment length polymorphism (RFLP-PCR)

HPV was detected using a sPCR with the primers MY09 (5'-CGTCCM AARGGAWACTGATC-3') and MY11 (5'-GCMCAGGGWCATAAYAATGG-3') as described previously16. PCR was performed using the following conditions: 5 min of denaturation at 94 ºC; 30 cycles of denaturation at 94 ºC for 30 s, annealing at 55 ºC for 60 s, and extension at 72 ºC for 60 s; and a final extension step at 72 ºC for 8 min (Thermal cycler, Applied Biosystems, Foster City, CA, USA). This reaction produced a final amplification product of 450 base pairs (bp). The DNA quality was tested by the amplification of a 268 bp gene fragment of the human β-globin gene using the primers GH20 (5'-GAAGAGCCAAGGACAGGTAC-3') and PC04 (5'-C AACTTCATCCACGTTCACC-3') under identical conditions as the ones of the HPV-PCR. Two types of controls were used in the reaction: a sample without DNA (negative control) and an HPV-positive cervical sample (positive control).

The final amplification products were loaded onto a 1% agarose gel stained with 150 ng/μL ethidium bromide and subjected to electrophoresis in a horizontal apparatus at 110 V for 45 min in 0.5 × TBE buffer (45 mM Tris-borate, 1 mM EDTA, pH 8.0). A 100 bp marker (Invitrogen, Thermo Fisher Scientific, Waltham, MA, USA) was used as a molecular size marker. The amplified DNA fragments were visualized in a transilluminator with UV light and photographed.

HPV-positive samples were genotyped by RFLP analysis, in which amplified DNA was cleaved with restriction enzymes to generate DNA fragments of different molecular sizes. Aliquots of each amplification product were subjected to digestion with the restriction enzyme HpyCH4V (New England Biolabs, Ipswich, MA, USA)17. To better differentiate between HPV genotypes with similar RFLP patterns, such as HPV11/30, 18/68, 44/55 and 61/83/84, a second restriction enzyme was used (NlaIII, New England Biolabs, Ipswich, MA, USA)18. The restriction digest fragments were then subjected to electrophoresis on 8% polyacrylamide gels. Both, 100 and 25 bp ladders (Invitrogen, Carlsbad, CA, USA) were used as molecular sizemarkers. After electrophoresis, polyacrylamide gels were analysed with the LabImage ID software (Loccus Biotechnology, Cotia, Sao Paulo, Brazil), and the size of each fragment was determined. Genotyping was performed by comparing the molecular weights of the fragments for each HPV genotype as described by Santiago et al.17. A total of 40 individual HPV genotypes were determined by PCR-RFLP: 11 genotypes are considered high-risk (HR-HPV: 16, 18, 31, 33, 35, 39, 45, 51, 52, 56 and 58); 11 are probably oncogenic (26, 30, 34, 53, 66, 67, 68, 69, 70, 73and 82), and 18 are low-risk genotypes (LR-HPV) that are not associated with carcinogenesis (6, 11, 40, 42, 43, 44, 54, 55, 61, 62, 64, 69, 72, 74, 81, 83, 84, and 91)19.

The patients positively diagnosed for HPV were requested to repeat the tests after 6 months, for the follow-up and to verify the presence of viruses.

Simultaneous detection of seven important STIs by multiplex PCR (M-PCR)

A M-PCR was performed to simultaneously detect C. trachomatis, N. gonorrhoeae, M. genitalium, T. vaginalis, HSV-1, HSV-2, and T. pallidum as previously described by Souza et al.13 (Table 1). M-PCR was carried out using the following conditions: 10 min of denaturation at 94 ºC; 35 cycles of denaturation at 94 ºC for 60 s, annealing at 62 ºC for 60 s, and extension at 72 ºC for 60 s; and a final extension step at 72 ºC for 10 min (Thermal cycler, Applied Biosystems, Thermo Fisher Scientific, Waltham, MA, USA). The M-PCR products were electrophoresed on an 8% polyacrylamide gel. Positive controls for all analysed STIs were from positive clinical samples detected using reference methods, including culture and/ or sPCR. All clinical samples were also tested by using human β-globin-specific primers and GH20/PC04 as an internal control of amplification and of DNA integrity, under the same conditions of the M-PCR. The patients positively diagnosed for ISTs were followed-up and treated according to the Brazilian Clinical Protocol and Therapeutic Guidelines20.

Table 1
Oligonucleotide primers used in the multiplex-PCR assays.

Statistical analysis

Statistical analysis was performed with the software GraphPad Prism 6.0 (San Diego, California, USA), and the statistical significance was set at P <0.05. Different variables were evaluated for comparisons and analytical calculations based on the presence of HPV and STIs. A two-sided Fisher’s exact test with 2 × 2 contingency tables was used to evaluate statistically significant differences between groups. Crude odds ratios (OR) with 95% confidence intervals (CI) were calculated to estimate the association of HPV and STI positive results with different cytological findings.

RESULTS

Population characteristics

A total of 210 women were enrolled in the study, including 166 students (79.0%), 26 employees (12.4%) and 18 participants who did not inform their roles at the University (8.6%). The mean age of the examined population was 27.1 years (range 18-50 years). The majority of the participants were white (85.2%), single (80.0%), and had never been pregnant (75.2%). Oral contraceptive use was frequent (60.0%), whereas smoking was relatively rare (8.1%). Most women (60.5%) had their first sexual intercourse before the age of 18 years old (range 13-39), the majority had a current sexual partner (72.4%) and more than one partner during their lives (68.1%) (Table 2).

Table 2
Characteristics of the study population based on the detection of HPV-DNA and other STI agents.

Prevalence of HPV and seven other important STIs

HPV DNA was detected in 71 women (33.8%) aged 25.9 ± 7.35 years, by means of sPCR. Twenty-nine HPV types were identified (Table 3), including 10 HR-HPV (16, 18, 31, 33, 39, 45, 51, 56, 58, and 59), 7 probably oncogenic HPV (26, 66, 68, 69, 70, 73, and 82), and 12 LR-HPV (6, 11, 13, 43, 54, 61, 62, 64, 72, 74, 81, and 83). HPV16 (31.0%, n=22/71), HPV70 and HPV82 (11.3%, n=8/71 each) represented the most frequently identified genotypes. HPV16 was the most common genotype in mono-infections, as well as in multiple infections with frequencies of 18.0% (n=13/71) and 12.7% (n=9/71), respectively.

Table 3
Identification of HPV genotypes according to their oncogenic potential (oncogenic, probably oncogenic, and non-oncogenic genotypes) in the total of HPV-positive women group (n=71).

Among HPV-DNA-positive women (n=71), HR-HPV genotypes, probably oncogenic types, and LR-HPV were detected in 59.1% (n=42/71), 16.9% (n=12/71) and 24% (n=17/71), respectively. Multiple HPV genotypes infections were very common, being detected in 42.2% of the total infections (n=30/71). Twenty-eight of these participants (93.3%) were infected by two HPV genotypes, and two patients (6.7%) by three HPV types.

At least one STI agent was detected in 11.4% of the participants (n= 24/210) by M-PCR. The identified species included C. trachomatis (6.7%; n= 14/210), T. pallidum (1.9%; n= 4/210), HSV-2 (0.5%, n= 1/210), N. gonorrhoeae (0.5%, n= 1/210), T. vaginalis (0.5%, n= 1/210), HSV-1 and M. genitalium coinfection (0.5%, n= 1/210), HSV-1 and T. vaginalis coinfection (0.5%, n= 1/210), and HSV-2 and N. gonorrhoeae coinfection (0.5%, n= 1/210). Figure 1 shows the frequency of STI agents detected by M-PCR in all cases (n=24). All individuals who tested positive for STIs were asymptomatic.

Figure 1
Prevalence of non-HPV STIs agents in STI-positive women (n=24). Infections were assessed by multiplex-PCR.

Among HPV-positive women, 14.1% (n= 10/71) were coinfected with other STI agents. The most frequent coinfection was with C. trachomatis (50.0%; n= 5/10), followed by T. pallidum (20.0%; n= 2/10). N. gonorrhoeae, T. vaginalis, and M. genitalium coinfections with HSV-1 were also observed (10.0%; n=1/10; one case each). The HPV genotypes implicated in STI coinfections are shown in Table 4. Table 2 shows the characteristics of women positive for HPV and STIs and that participants with 25 years or younger as well as the ones that had more than one partner during their lives were associated with having HPV infection (P=0.02 for both analyses).

Table 4
Coinfection of different HPV genotypes with other STI agents

Cytological findings

Most Pap smear results were NILM (90.5%, n=190/210). Cytological abnormalities were observed in 9.5% (n=20/210) of the smears, including 15 women with ASC-US (7.1%, n=15/210) and five with LSIL (2.4%, n=5/210). No evidence of ASC-H, HSIL or CC was detected.

Among the HPV-positive women, 76.1% (n=54/71) had NILM. Furthermore, 23.9% (n=17/71) presented with abnormal cytology, including 16.9% with ASC-US (n=12/71) and 7.0% with LSIL (n=5/71). In the positive women for STIs as determined by M-PCR, 87.5% had a NILM cytology (n=21/24), and among them three (12.5%) had cytological abnormalities, including two with ASC-US (8.3%) and one with LSIL (4.2%). Among women with ASC-US, one was positive for C. trachomatis and one for T. vaginalis, whereas the woman with LSIL was positive for C. trachomatis.

Table 5 shows the statistically significant association of HPV-DNA, HR-HPV, HPV16 and HPV-multiple infections with the presence of cytological abnormalities in the Pap test (P<0.0001; P<0.0001; P< 0.0001 and P=0.001 respectively). There was a marginal statistical difference in the presence of coinfection of HPV and other STI agents with abnormal cytology (P= 0.056).

Table 5
Overall rates of HPV and other STI agents in the study population based on cytological findings.

DISCUSSION

The present study shows a prevalence of HPV-DNA (33.8%) and seven other important STIs (11.4%), including C. trachomatis, N. gonorrhoeae, M. genitalium, T. vaginalis, HSV-1, HSV-2, and T. pallidum, in asymptomatic women at a Brazilian university. The majority of participants were students (79.0%) and most positive women for HPV and STIs were younger than 25 years (69.0% and 66.7%, respectively). Although we have detected a high prevalence of HPV, the rate of cervical cytological abnormalities was low (9.5%). Furthermore, the rates of HPV-multiple infections were also high (42.2%) while the most prevalent HPV was HPV16.

In our study, the HPV rate was high as was the case of other Brazilian universities in the Northern and Central regions, in which frequencies of 25.5% and 47% were found, respectively21,22. Studies carried out at universities in different regions of the world found rates similar to ours23,24. In general, HPV prevalence studies have shown that the HPV-DNA detection rate in cervical specimens may vary depending on the investigated geographic place, with a higher prevalence in younger women aged 25 or less, which later decreases visibly in middle-age women25.

The identification of HPV genotypes is relevant for the prophylaxis and treatment of the disease. The detection of HR-HPV is very important due to its greater propensity to persist and lead to the development of precancerous lesions and CC6,7,8,25. In our study, 59.1% of the HPV-positive women presented with HR-HPVs; genotype 16 was the most common among the genotypes and was followed by genotypes 70 and 82. Worldwide data on HPV genotypes prevalence have shown that genotype 16 is most widely distributed globally, followed by genotype 18; these two together are responsible for about 71% of all cervical cancers. Furthermore, the second most frequent HPV genotype may vary in different geographical regions25. Interestingly, the other HPV genotypes that were more commonly observed in our study (HPV70 and HPV82) are classified as probably oncogenic genotypes and are not included in currently available HPV vaccines.

The presence of multiple HPV genotypes was frequent in our study (42.2%). Previous investigations of Brazilian university students have shown the presence of multiple HPV genotypes infection in 41% to 54.3% of women21,22. C. trachomatis, T. pallidum, N. gonorrhoeae, T. vaginalis, HSV-2, and coinfections between HSV-1 and T. vaginalis, HSV-1 and M. genitalium, and finally N. gonorrhoeae and HSV-2 were detected in this study. Among young women, genital C. trachomatis is the most prevalent bacterial STI1. Accordingly, in our investigation C. trachomatis was the most frequent species (6.7%), followed by T. pallidum.

C. trachomatis prevalence in asymptomatic women has already been examined26,27. In studies conducted in different Brazilian regions, C. trachomatis genital infection rates varied and these differences may be related to the methodology of detection and the population profile12,27,28. The mean age among women infected with C. trachomatis in our study was low (25.7 years); this finding is in agreement with the majority of previous reports on the association of C. trachomatis infection and younger age in women26,28. Although most C. trachomatis cases are poorly symptomatic, a chronic and persistent infection may lead to severe complications for women’s health2,20. Therefore, it is extremely important to diagnose this infection in young asymptomatic women. In this sense, currently, there has been a great advance and improvement in C. trachomatis control, and prevention programs worldwide recommend that all sexually active females of 25 years of age or younger should undergo an annual screening29,30.

The number of T. pallidum infected individuals is increasing in many countries, emphasizing the need of early diagnoses2. In the present study, the prevalence of syphilis was 1.9%. Similar results were obtained by Abreu et al.31 (1.7%) in Brazilian women using PCR-based methods. And other Brazilian studies obtained lower results in women tested by serological methods32,33.

N. gonorrhoeae, T. vaginalis, HSV1/2, and M. genitalium were also detected in the present study. They have been frequently investigated with different prevalence rates depending on the population characteristics and methodology6,31,34,35.

Several authors have found an association of host epidemiological characteristics such as multiple sexual partners, smoking habit, oral contraceptive use, and age of the first sexual intercourse6,36 with persistence of HPV. However, many studies have not replicated this association; therefore, there is no consensus regarding the cofactors leading to the persistence of HPV infection7,36. Our analysis showed an association with the presence of HPV for age groups younger than 25 years and those women who had more than one partner during their lives.

The vast majority (90.5%) of women in this study did not present with cytological abnormalities and among them, 28.4% were HPV-DNA-positive. Similar results regarding the lack of cytological changes have been shown by another study conducted among university students from Northern Brazil; the authors found no cytological abnormalities in 85.7% of women, and 23.4% of them were HPV-positive21. An investigation involving university women in Central Brazil observed high rates of HPV in participants with normal cytology22.

In a meta-analysis of worldwide data, Bruni et al.37 showed that only 11.7% of women with normal cytology had detectable DNA-HPV; however, in the current study the mean population age was different. Thus, it appears that in younger women, the rate of HPV associated with normal cytological findings is higher, so that the estimate of HPV infection in NILM can vary among populations depending on the geographical region and age25,37. Furthermore, only about 10-30% of women with detectable HPV-DNA show cytological abnormalities25, and our results corroborated these data.

In the present study, abnormal cytology was found in 9.5% of women, represented by 7.1% ASC-US and 2.4% LSIL. Vieira et al.21 have shown a low prevalence of abnormal cytology (2.3% for HSIL, 0.4% for ASC-H, 6.4% for LSIL, and 5.3% for ASC-US) among university students, in Brazil. Rabelo-Santos et al.22 detected cytological abnormalities in 8.7% of all suitable cervical university students’ smears in a study conducted in Central Brazil, and HSIL was not present. In Canada, an investigation found a prevalence of 7.2% ASC-US, 3.4% LSIL, and 0.8% HSIL in the same type of population24. Cervical abnormalities may develop decades after the HPV infection and are, therefore, less frequent in younger populations. Among abnormal cytological findings, the majority (85.0%) were positive for HPV-DNA as expected38.

The statistical analysis showed that the detection of HPV, HR-HPV, HPV16 and multiple HPV infections were associated with the presence of cytological abnormalities. Our results are in accordance with several studies demonstrating this correlation10,12,39.

A marginal statistical significance between HPV associated with other STIs was observed according to the cytological findings. Several studies have reported that other STIs, especially C. trachomatis, increase the risk of acquiring an HPV infection and/ or are associated with the development of intraepithelial lesions40,41, but others did not find this association42.

CONCLUSION

The majority of HPV-positive patients did not return for follow-up so that it was not possible to verify data on the history of previous HPV infections from these women, which limits our interpretations on the persistence of HPV and its influence on the genesis of cytological abnormalities. In addition, the frequency of coinfections between HPV and other STI agents was low to enable a suitable evaluation on the influence of this association in abnormal cytology findings. In conclusion, the present study has shown a high prevalence of HPV and C. trachomatis as important STI agents, in younger asymptomatic university women accompanied by low rates of cytological abnormalities. Multiple HPV infections were also frequent, and the most prevalent genotype was HPV16. These results highlight the need to adopt public policies for the prevention and early diagnosis of STIs in young and asymptomatic women and to prevent future consequences, including the development of cervical lesions and cancer.

ACKNOWLEDGMENTS

This work was supported by Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (CNPq), grant Nº 484994/2013-1.

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Publication Dates

  • Publication in this collection
    20 Jan 2021
  • Date of issue
    2021

History

  • Received
    10 June 2020
  • Accepted
    4 Dec 2020
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