C |
81 |
Malaysia |
I → M |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
81 |
Thailand |
I → M |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
81 |
México |
I → M |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
81 |
Honduras |
I → M |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
prM |
139 |
French Polynesia |
S → N |
40
40. Yuan L, Huang XY, Liu ZY, Zhang F, Zhu XL, Yu JY, et al. A single mutation in the prM protein of Zika virus contributes to fetal microcephaly. Science. 2017;358(6365):933-6.
|
|
139 |
Brazil |
S → N |
40
40. Yuan L, Huang XY, Liu ZY, Zhang F, Zhu XL, Yu JY, et al. A single mutation in the prM protein of Zika virus contributes to fetal microcephaly. Science. 2017;358(6365):933-6.
|
|
168 |
Malaysia |
D → K |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
E |
356 |
China |
D → N |
43
43. Liu Z, Zhang Y, Cheng M, Ge N, Shu J, Xu Z, et al. A single nonsynonymous mutation on ZIKV E protein-coding sequences leads to markedly increased neurovirulence in vivo. Virol Sin. 2022;37(1):115-26. Available from: https://doi.org/10.1016/j.virs.2022.01.021 https://doi.org/10.1016/j.virs.2022.01.0...
|
|
451 |
Colombia |
D → E |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
451 |
Panama |
D → E |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
456 |
Brazil |
R → K |
37
37. Strottmann DM, Zanluca C, Mosimann ALP, Koishi AC, Auwerter NC, Faoro H, et al. Genetic and biological characterization of zika virus isolates from different Brazilian regions. Mem Inst Oswaldo Cruz. 2019;114(7):1-11.
|
|
763 |
China |
V → M |
42
42. Collette NM, Lao VHI, Weilhammer DR, Zingg B, Cohen SD, Hwang M, et al. Single Amino Acid Mutations Affect Zika Virus Replication In Vitro and Virulence In Vivo. Viruses. 2020;12(11):1295. Available from: http://www.ncbi.nlm.nih.gov/pubmed/33198111 http://www.ncbi.nlm.nih.gov/pubmed/33198...
|
|
600 |
Thailand |
A → E |
24
24. Jaimipuk T, Sachdev S, Yoksan S, Thepparit C. A Small-Plaque Isolate of the Zika Virus with Envelope Domain III Mutations Affect Viral Entry and Replication in Mammalian but Not Mosquito Cells. Viruses. 2022;14(3):480. Available from: https://www.mdpi.com/1999-4915/14/3/480 https://www.mdpi.com/1999-4915/14/3/480...
|
|
620 |
Puerto Rico |
V → L |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
620 |
Malaysia |
L → V |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
683 |
Thailand |
E → K |
24
24. Jaimipuk T, Sachdev S, Yoksan S, Thepparit C. A Small-Plaque Isolate of the Zika Virus with Envelope Domain III Mutations Affect Viral Entry and Replication in Mammalian but Not Mosquito Cells. Viruses. 2022;14(3):480. Available from: https://www.mdpi.com/1999-4915/14/3/480 https://www.mdpi.com/1999-4915/14/3/480...
|
|
691 |
Malaysia |
Y → H, H → Y |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
NS1 |
852 |
Panama |
F → S |
33
33. Collins ND, Widen SG, Li L, Swetnam DM, Shi PY, Tesh RB, et al. Inter- and intra-lineage genetic diversity of wild-type Zika viruses reveals both common and distinctive nucleotide variants and clusters of genomic diversity. Emerg Microbes Infect . 2019;8(1):1126-38.
|
|
969 |
Honduras |
Y → S |
33
33. Collins ND, Widen SG, Li L, Swetnam DM, Shi PY, Tesh RB, et al. Inter- and intra-lineage genetic diversity of wild-type Zika viruses reveals both common and distinctive nucleotide variants and clusters of genomic diversity. Emerg Microbes Infect . 2019;8(1):1126-38.
|
|
1033 |
Colombia |
S → N |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
1033 |
Porto Rico |
S → N |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
1033 |
Panama |
S → N |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
1143 |
Brazil |
V → M |
37
37. Strottmann DM, Zanluca C, Mosimann ALP, Koishi AC, Auwerter NC, Faoro H, et al. Genetic and biological characterization of zika virus isolates from different Brazilian regions. Mem Inst Oswaldo Cruz. 2019;114(7):1-11.
|
NS2A |
1176 |
Brazil |
T → I, I → T |
37
37. Strottmann DM, Zanluca C, Mosimann ALP, Koishi AC, Auwerter NC, Faoro H, et al. Genetic and biological characterization of zika virus isolates from different Brazilian regions. Mem Inst Oswaldo Cruz. 2019;114(7):1-11.
|
|
1180 |
Brazil |
I → Y, T → I |
37
37. Strottmann DM, Zanluca C, Mosimann ALP, Koishi AC, Auwerter NC, Faoro H, et al. Genetic and biological characterization of zika virus isolates from different Brazilian regions. Mem Inst Oswaldo Cruz. 2019;114(7):1-11.
|
|
1263 |
Brazil |
V → A |
37
37. Strottmann DM, Zanluca C, Mosimann ALP, Koishi AC, Auwerter NC, Faoro H, et al. Genetic and biological characterization of zika virus isolates from different Brazilian regions. Mem Inst Oswaldo Cruz. 2019;114(7):1-11.
|
|
1263 |
Malaysia |
V → A |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
1263 |
Thailand |
A → V |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
1303 |
Panama |
A → V |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
1303 |
Malaysia |
V → A |
32
32. Shrivastava S, Puri V, Dilley KA, Ngouajio E, Shifflett J, Oldfield LM, et al. Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. Sci Rep. 2018;8(1):1-11.
|
|
1327 |
Brazil |
M → V, V → M |
37
37. Strottmann DM, Zanluca C, Mosimann ALP, Koishi AC, Auwerter NC, Faoro H, et al. Genetic and biological characterization of zika virus isolates from different Brazilian regions. Mem Inst Oswaldo Cruz. 2019;114(7):1-11.
|
|
1370 |
Honduras |
G → R |
33
33. Collins ND, Widen SG, Li L, Swetnam DM, Shi PY, Tesh RB, et al. Inter- and intra-lineage genetic diversity of wild-type Zika viruses reveals both common and distinctive nucleotide variants and clusters of genomic diversity. Emerg Microbes Infect . 2019;8(1):1126-38.
|
NS2B |
1411 |
Cambodia |
I → T |
38
38. Regla-Nava JA, Wang YT, Fontes-Garfias CR, Liu Y, Syed T, Susantono M, et al. A Zika virus mutation enhances transmission potential and confers escape from protective dengue virus immunity. Cell Rep. 2022;39(2):110655. Available from: https://doi.org/10.1016/j.celrep.2022.110655 https://doi.org/10.1016/j.celrep.2022.11...
|
NS3 |
1594 |
Brazil |
H → Y, Y → H |
37
37. Strottmann DM, Zanluca C, Mosimann ALP, Koishi AC, Auwerter NC, Faoro H, et al. Genetic and biological characterization of zika virus isolates from different Brazilian regions. Mem Inst Oswaldo Cruz. 2019;114(7):1-11.
|
|
1857 |
Thailand |
H → Y |
24
24. Jaimipuk T, Sachdev S, Yoksan S, Thepparit C. A Small-Plaque Isolate of the Zika Virus with Envelope Domain III Mutations Affect Viral Entry and Replication in Mammalian but Not Mosquito Cells. Viruses. 2022;14(3):480. Available from: https://www.mdpi.com/1999-4915/14/3/480 https://www.mdpi.com/1999-4915/14/3/480...
|
NS4B |
2295 |
Brazil |
I → T |
37
37. Strottmann DM, Zanluca C, Mosimann ALP, Koishi AC, Auwerter NC, Faoro H, et al. Genetic and biological characterization of zika virus isolates from different Brazilian regions. Mem Inst Oswaldo Cruz. 2019;114(7):1-11.
|
|
2857 |
China |
E → D |
41
41. Li S, Shi Y, Zheng K, Dai J, Li X, Yuan S, et al. Morphologic and molecular characterization of a strain of zika virus imported into Guangdong, China. PLoS One. 2017;12(1):1-11.
|