Open-access Ion chromatography for dairy product analysis: a technical and regulatory review

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Abstract

Ion chromatography (IC) is a well-established analytical technique for quantifying ionic species in complex food matrices, offering high sensitivity, selectivity, and multi-analyte detection capability. This review provides a critical and comprehensive overview of IC applications in dairy product quality control and regulatory compliance, focusing on the determination of electrolytes (Na+, K+, Ca2+, Mg2+), inorganic anions (Cl−, NO3−, SO42−, PO43−), organic metabolites (citrate, lactate), carbohydrates, amino acids, and contaminants. A systematic literature search was conducted in Scopus and Google Scholar (2000–2026) using keyword combinations related to ion chromatography and dairy products. From 287 initial records, 98 peer-reviewed articles met the inclusion criteria after full-text assessment. Manual screening of reference lists yielded 110 references, demonstrating that IC contributes significantly to adulteration detection, nutritional monitoring, quality assessment of processing steps (pasteurization, maturation), and compliance with international standards. Major identified gaps include (i) the absence of standardized IC methods for amino acid and peptide profiling in dairy matrices; (ii) the limited application of IC coupled to high-resolution mass spectrometry for non-target screening of emerging contaminants; and (iii) insufficient comparative studies between IC and alternative techniques (IC-mass spectrometry or ICP-based methods) across different dairy products. Emerging trends are discussed, including advanced sample preparation (online dialysis), miniaturization (capillary IC), automation, chemometrics and machine learning for fraud detection, and sustainability-driven approaches (green chemistry, reagent-free IC systems). This review aims to contribute to researchers, industry professionals, and regulatory authorities by identifying priority areas for future IC methodological development.

Keywords:
Ionic speciation; Food adulteration; Quality assurance; Analytical validation; Dairy safety; Chromatographic methods

Highlights

Ion chromatography (IC) enables accurate ion profiling in dairy matrices

IC supports quality control, safety assessment, and the detection of adulteration in dairy matrices

IC improves speed, sensitivity, and regulatory compliance in chemical analyses of dairy matrices

1 Introduction

Ion chromatography (IC) is a well-established technique in food science for quantifying cations and anions in complex matrices, offering high sensitivity, selectivity, minimal sample preparation, multianalyte analysis in a single run, low detection limits (ppb range), reduced solvent consumption, and alignment with green chemistry practices, making it the preferred method for food safety, quality control, and regulatory compliance (Bruggink & Jensen, 2021; Fritz & Gjerde, 2009; Leng et al., 2025; Muntean, 2022).

In food analysis, IC is widely applied to determine inorganic nutrients (calcium, sodium, potassium, magnesium, chloride, and phosphate) and monitor contaminants (nitrate, nitrite, perchlorate, and sulfite). Advances in stationary phases, automation, and coupled techniques (IC‒MS, IC‒ICP‒MS) have increased productivity and robustness, enabling rapid, reliable analyses in complex matrices with minimal pretreatment (Fritz & Gjerde, 2009; Muntean, 2022).

Dairy products particularly benefit from IC analysis. Studies have demonstrated its application in quantifying free inorganic ions (sodium, potassium, ammonium, calcium, magnesium, chloride, phosphate, and sulfate) in milk and cheese (Hu & Rohrer, 2020; Wei et al., 2017). Wei et al. (2017) developed a column-switching method for the simultaneous determination of L-carnitine, choline, and cations in infant formulas (94–105% recoveries; mg/L detection limits). IC also detects undesirable ions from agricultural inputs or processing, nitrate, nitrite, chlorate, perchlorate, and bromate (Michalski, 2016; Muntean, 2022; Suess, 2021).

Previous reviews focused on ion chromatography in the context of food analysis (Muntean, 2022) or its technical fundamentals (Nesterenko et al., 2023; Weiss, 2016). Regarding IC and dairy matrices, Poitevin (2016) reviewed the detection of minerals and trace elements in infant formula, while Michalski & Pecyna-Utylska (2021) were responsible for the sample preparation. We are not aware of any other literature review on ion chromatography for dairy products addressing a comprehensively and critically integrated review embracing: (i) the theoretical foundations of IC tailored to complex dairy matrices; (ii) a compilation of IC applications for different analyte classes (minerals, carbohydrates, organic acids, amino acids, choline, and contaminants); (iii) the alignment with regulatory standards (AOAC, ISO, IDF) that certify official IC methods; and (iv) the perspectives of the IC uses emphasizing sustainability and green chemistry. Given this gap, this review provides an updated framework that connects theory, practice, and regulation involved in the quality control and safety of dairy products. Therefore, this review promotes the integration of three dimensions of IC for dairy product analysis: theoretical foundations of IC, ordered presentation of IC analytical parameters (LOD, LOQ, recovery, and RSD), and regulatory standards (AOAC, ISO, and IDF), combined with a discussion on automation, chemometrics, and green chemistry.

This review addresses the crucial role of ion chromatography in quantifying ionic components in dairy products given the complexity of food samples. Our main objectives include providing guidance on applications, considering technological advances and existing practices, addressing sample preparation, column selection, analytical configurations, reagents, and appropriate detection, in addition to contributing to quality control, regulatory compliance, and quality standards in the dairy industry.

2 Methodology

This narrative review was conducted by searching the Scopus and Google Scholar databases using combinations of the following keywords: ‘ion chromatography’, ‘chromatographic applications’, ‘ion chromatography in dairy products’, ‘dairy quality and safety’, ‘chromatographic methods’ and ‘sample preparation for chromatography’. The specific search strings used were (“ion chromatography” OR “chromatographic applications”) AND (“dairy” OR “cheese” OR “yogurt” OR “milk”), and (“ion chromatography” AND “dairy quality” AND “safety”).

The search was conducted between 2000 and 2026 and covered all publications available up to the manuscript preparation date, including both initial studies and recent advances on IC and dairy matrices, as shown in Figure 1. Only peer-reviewed articles, systematic reviews, and standardized analytical methods published in English were considered. The reference lists of selected articles were also manually screened to identify additional relevant studies (a snowballing method).

Figure 1
Methodological evolution of chromatography over time, highlighting the main technological advances in ion chromatography since its creation in 1975 to the present.

The following inclusion criteria were applied to the search: (a) studies addressing ion chromatography applications in dairy quality control; (b) development or validation of methods for ionic species in dairy matrices; and (c) original experimental data.

In turn, the exclusion criteria were applied: (a) articles not directly related to applications in the dairy sector or lacking practical relevance for quality monitoring, (b) conference abstracts, and (c) book chapters without peer review.

Selection process and article numbers: The initial search yielded 287 articles after duplicate removal. After screening by title and abstract, 163 articles were excluded, leaving 124 for full-text review. After the full-text assessment, 98 articles met the inclusion criteria. An additional 12 articles were identified through manual screening of reference lists, bringing the total to 110.

The selected studies were organized into five thematic categories: (1) theoretical and analytical foundations of ion chromatography; (2) sample preparation techniques for dairy matrices; (3) role of ion chromatography in monitoring dairy composition and safety; (4) practical applications in dairy products (minerals, carbohydrates, organic acids, amino acids, and contaminants); and (5) regulatory standards, methodological limitations, and future perspectives.

This structure provides an integrated overview of current practices and emerging trends in ion chromatography to ensure dairy product quality and safety. Figure 2 summarizes the article selection procedure.

Figure 2
Flowchart of the article selection for the review. The search, conducted between 2000 and 2026, used the Scopus and Google Scholar databases. After duplicate removal, the titles and abstracts of 287 records were screened, resulting in 124 articles for full-text assessment. After the full texts were read, 98 articles met the inclusion criteria. An additional 12 articles were identified through manual screening of reference lists (snowball sampling), yielding a total of 110 articles included in the review.

3 Theoretical aspects of ion chromatography

Throughout this review, the abbreviation IC refers to ion chromatography, an analytical method that separates ions based on their interactions with an ion-exchange stationary phase. Ion-exchange chromatography is the most common IC separation mechanism. Techniques such as high-performance anion-exchange chromatography with pulsed amperometric detection (HPAEC-PAD) are specific IC configurations optimized for carbohydrates. IC‒MS and IC‒ICP‒MS refer to IC coupled with mass spectrometry, either by electrospray ionization (ESI‒MS) or inductively coupled plasma (ICP‒MS).

3.1 Separation mechanisms

Chromatography separates molecules based on their differential interactions with the mobile and stationary phases. Ion chromatography (IC) uses three mechanisms, depending on the analyte properties and analytical objectives (Weiss, 2016). As with conventional ion exchange methods, several hybrid approaches and coupled detectors have expanded the analytical scope of ion chromatography (Table 1).

Table 1
Main techniques applied to ion chromatography.

3.2 Columns

Chromatographic columns form the backbone of ion chromatography, critically defining separation efficiency, selectivity, and robustness. characteristics: (1) they are typically manufactured from inert materials (PEEK or stainless steel) to withstand pressures up to 400 bar, 50–250 mm in length, 2.0–4.6 mm in internal diameter (Muntean, 2022); (2) their stationary phase of silica or polymeric resin spheres are grafted with ionic functional groups of quaternary ammonium for anion exchange and sulfonate or carboxylate for cation exchange; (3) the anion exchange resins have porous polymeric beads (high capacity, pH resistance) and latex-based particles (sharper peaks via shorter diffusion paths); (4) the cation exchange resins have strongly acidic (sulfonate, fully ionized across a wide pH range) or weakly acidic (carboxylate, pH-dependent ionization requiring precise control); (5) the resin particle size affects column performance: microporous particles (3–10 µm) balance efficiency and backpressure; sub-2 µm and core-shell designs increase resolution at higher pressure; and monolithic columns offer high permeability for fast bioanalytical applications (Fanali et al., 2023; Muntean, 2022); (6) the density and distribution of resins influence column capacity, selectivity, and kinetic performance; and (7) the proper column conditioning, regeneration, and maintenance prevent fouling and ensure reproducible performance, requiring alignment of column selection with method requirements, sample throughput, and sustainability considerations (Fritz & Gjerde, 2009).

3.3 Detectors

IC detectors convert eluted ions into measurable signals, providing qualitative and quantitative compositional data. The detectors provide (1) conductivity detection, which is a prototypical approach, exploits the direct relationship between ionic concentration and electrical conductivity; post-column eluent quenching converts highly conductive eluents into weakly conductive species (water, weak acids), reducing background noise and enabling detection at low levels (µg/L) essential for trace analyses (Fritz & Gjerde, 2009; Muntean, 2022); (2) UV–Vis detection that quantifies light absorption by chromophoric species (e.g., nitrite, nitrate) or analytes derivatized with color-forming reagents, offering fast, economical measurements but limited selectivity for absorbing compounds (Fritz & Gjerde, 2009; Muntean, 2022); (3) fluorescence detection that achieves parts-per-trillion sensitivity for intrinsically fluorescent compounds or those made fluorescent by post-column derivatization, making it valuable for organic acids and polyphenols at trace concentrations in complex food matrices (Nesterenko et al., 2023); (4) electrochemical detection that encompasses potentiometric methods (ion-selective electrodes measuring potential difference) and amperometric methods (current from redox reactions), with pulsed electrochemical detection expanding applicability through periodic electrode cleaning (Fritz & Gjerde, 2009; Muntean, 2022); (5) refractive index detection, which is a universal detector for non-volatile, non-chromophore solutes but requires strict temperature and flow control due to baseline instability (Fritz & Gjerde, 2009; Muntean, 2022); and (6) evaporative light scattering that detects non-volatile compounds (carbohydrates, lipids, polymers) by nebulizing the eluent, evaporating the solvent, and measuring light scattered by residual particles — invaluable when analytes lack UV absorbance or conductivity (Fritz & Gjerde, 2009). Coupled techniques represent the cutting edge; e.g., IC–ESI–MS and IC–HESI–MS enable structural elucidation of polar metabolites and peptides at nanomolar concentrations, while IC–ICP–MS provides robust speciation of trace elements (As, Cr, Hg, Se) at parts-per-trillion levels. These combinations offer unparalleled specificity but require rigorous mobile-phase compatibility and entail high operational costs, limiting routine use to specialized laboratories (Nesterenko et al., 2023).

3.4 Suppression system

Suppression systems are essential for detecting low-concentration analytes by reducing mobile-phase background conductivity. The high electrolyte concentrations required for effective elution generate baseline noise that can mask analyte signals. Chemical and electronic strategies are the two main suppression systems. In chemical suppression, the column effluent passes through an ion-exchange suppressor, where regenerant protons convert carbonate or hydroxide eluents into weakly conductive species (water or carbonic acid), minimizing noise and achieving µg/L detection limits with excellent reproducibility (Fritz & Gjerde, 2009; Muntean, 2022). In electronic suppression, a controlled direct-current field is applied across a suppressor cell to drive ionic conversion without chemical regenerants, stabilizing the baseline near zero conductivity while eliminating reagent handling and waste. Modern electronic systems provide comparable performance with longer lifespans and lower operating costs, though they require precise electrical control and can be sensitive to pressure fluctuations (Weiss, 2016). Selection of the system depends on workflow: high-throughput laboratories benefit from automated, low-maintenance electronic operation, whereas labs handling complex, variable samples may favor the robustness and contamination tolerance of chemical suppressors. Regardless of system type, regular performance monitoring is essential.

3.5 Sample preparation

Detailed sample preparation is fundamental to accuracy, precision, and system longevity, particularly for complex matrices such as food, environmental water, and biological fluids, which may contain particles, proteins, lipids, and macromolecules that can clog columns, suppressors, and detectors. Customized approaches are employed to remove interferents and concentrate analytes while preserving species integrity (Table 2). Regardless of method, rigorous attention to routine consistency, reagent purity, pH adjustment, and run time is crucial for intra- and interlaboratory comparability; in addition, standard operating procedures, proficiency testing, and full method validation are required to ensure reliable, reproducible data.

Table 2
The advantages and disadvantages of supplementary sample preparation steps.

3.6 Advantages and limitations of ion chromatography

Ion chromatography (IC) incorporates green analytical chemistry principles through its predominantly aqueous eluents, minimizing the use of organic solvents and hazardous waste while enabling the simultaneous determination of multiple ionic species in a single analysis. Its high sensitivity and selectivity make it indispensable for water quality monitoring, environmental surveys, pharmaceutical impurity profiling, and clinical electrolyte assays. Advances in automation and miniaturization have produced compact benchtop systems with integrated components offering high throughput and low reagent consumption, aligning with sustainability goals (Nesterenko et al., 2023).

However, IC faces challenges with highly complex matrices: components such as organic matter, proteins, or colloids can cause column fouling, increased backpressure, and peak deterioration, requiring preventive maintenance that increases costs and downtime. Specialized columns and reagents can also make routine IC methods more expensive than single-analyte alternatives. Furthermore, coupling with mass spectrometry imposes restrictions on the mobile phase (volatile electrolytes for electrospray) and demands advanced training, confining such systems primarily to research and regulatory laboratories with adequate infrastructure (Nesterenko et al., 2023).

Despite these limitations, continuous innovations in column materials (monolithic, core-shell particles), suppression technology (combining electronic convenience with chemical robustness), and detector platforms (miniaturized amperometric arrays, photonic crystal sensors) promise to expand the reach of ICs, reduce analysis times, increase robustness, and simplify multiplex analyses, consolidating its role as a versatile, high-performance technique capable of meeting evolving analytical demands.

4 Importance of ion chromatography in food quality and safety

Ion chromatography (IC) plays a central role in ensuring the authenticity, quality, and safety of food, allowing the detection of characteristic ionic analytes that reveal adulterations, such as dilution, undeclared additives, or substitution with cheaper ingredients, thus protecting the integrity of the supply chain (Muntean, 2022; Robson et al., 2021).

Monitoring the process with IC enables the identification and quantification of specific ions to control nutritional losses during steps such as pasteurization or maturation, ensuring compliance with quality standards and optimizing the quality of the final product (AlYammahi et al., 2023; Kilic-Akyilmaz et al., 2022).

This technique is also routinely applied to detect inorganic contaminants, including heavy metals (Hg, Pb, and Cd), toxic species (CrO42−, As, ClO4−, BrO3−, and SO32−), and nitrite/nitrate from fertilizers or additives, which pose serious health risks at high levels. In addition, ion chromatography enables monitoring of essential elements, such as iodine (excessive intake of which can lead to thyroid disorders), and the determination of residual lactose in “lactose-free” products to prevent adverse reactions in consumers with lactose intolerance (Muntean, 2022; Nesterenko et al., 2023).

Ion chromatography ultimately ensures compliance with regulatory limits for nutrients and contaminants, verifies label information, and upholds legal standards, promoting transparency and trust in the food chain while guaranteeing the quality and safety of marketed products (Muntean, 2022; Nesterenko et al., 2023).

5 Applications of ion chromatography in dairy products

5.1 Minerals

Ion chromatography (IC) allows the simultaneous determination of cations and anions with high sensitivity and minimal reagent consumption (De la Guardia & Garrigues, 2015). The mineral composition of milk, influenced by genetic, environmental, and nutritional factors, includes macroelements (calcium, phosphorus, magnesium, sodium, potassium, and chloride) and essential trace elements (iron, zinc, copper, manganese, selenium, and iodine) necessary for metabolic functions and the physicochemical stability of casein proteins and micelles (Foroutan et al., 2019; Gaucheron, 2011; Muntean, 2022). Table 3 summarizes the applications of ion chromatography in the analysis of minerals in dairy matrices.

Table 3
Applications of ion chromatography for mineral determination in dairy products.

The complex milk matrix, which is rich in proteins and lipids, requires rigorous sample preparation (such as protein precipitation, Carrez clarification, in-line dialysis, or filtration) to minimize interference (Rahimi-Yazdi et al., 2010; Wei et al., 2017). Classical IC methods with unsuppressed conductometric detection have been adapted to quantify total and ionized calcium in milk and whey by converting calcium salts to free Ca2+, thereby ensuring accuracy and reproducibility.

For infant formulas, Wei et al. (2017) developed a method that couples a polymeric reverse-phase precolumn to a cation-exchange column, allowing simultaneous determination of L-carnitine, choline, Na+, K+, Mg2+, and Ca2+ with recoveries of 94–105%. Iodine speciation via IC‒ICP‒MS revealed iodide as the predominant bioavailable form in milk (van der Reijden et al., 2019).

Standardized sample preparation techniques and high-performance ion-exchange resins, combined with online eluent generation, have increased analytical productivity and reduced solvent use, establishing IC as an indispensable tool for quality control, food safety, and nutritional formulation research in dairy products (Cataldi et al., 2003; Metrohm, 2018; Suess, 2021).

Although IC is widely applied for simultaneous determination of cations (Na+, K+, Ca2+, and Mg2+) and anions (Cl−, PO43−, and citrate) in dairy products, ICP‒OES and ICP-MS offer lower detection limits (parts per trillion) for trace elements (e.g., Fe, Cu, and Se). The advantage of IC lies in its ability to perform simultaneous cation/anion determination in a single injection and in its lack of aggressive acid digestion, reducing preparation time and contamination risk. However, for routine trace element analysis, ICP‒MS is often preferable, whereas IC is more suitable when ionic speciation (e.g., free vs. bound phosphate) is relevant (Cataldi et al., 2003).

5.2 Carbohydrates

Ion chromatography (IC) is a widely used analytical tool for the determination of carbohydrates (lactose, galactose, glucose, fructose, sucrose, and maltose) and dairy products, supporting quality control, fermentation monitoring, and nutritional assessments. Pulsed amperometric detection is frequently employed because of its high specificity and low detection limits (Nesterenko et al., 2023).

Quantifying residual lactose in “lactose-free” products is critical for ensuring consumer safety. IC methods with pulsed amperometric detection offer robust performance and sensitivity below 10 mg/L, surpassing conventional enzymatic assays in terms of selectivity (Monti et al., 2017; Muntean, 2022; Panseri et al., 2021). N-acetylneuraminic acid (sialic acid) is a bioactive monosaccharide in human and bovine milk associated with immunological and cognitive benefits that has been quantified by pulsed amperometry ion chromatography at different stages of lactation, providing key data for the development of enriched infant formulas (Alahmad et al., 2021; Chenying et al., 2022).

Fructo-oligosaccharides (FOS), galacto-oligosaccharides (GOS), and oligosaccharides from human milk exert prebiotic effects, promoting beneficial effects on the gut microbiota. Anion-exchange IC with pulsed amperometric detection efficiently quantifies GOS and FOS in infant formulas, even in matrices with high levels of free lactose. For qualitative structural characterization without derivatization, IC coupled with mass spectrometry offers superior resolution and specificity (Lin et al., 2018; Zhang et al., 2021). Table 4 details the IC methods for dairy carbohydrate analysis, including detection methods, limits of detection, and sample preparation.

Table 4
Applications of ion chromatography for carbohydrate determination in dairy products.

HPAEC-PAD is the reference method for quantifying lactose, lactulose, and galactooligosaccharides in dairy products due to its high sensitivity (µg/L detection limits) and its lack of derivatization requirements. In comparison, HPLC-RI, although more accessible, has limited sensitivity (mg/L) and poor resolution for structurally similar carbohydrates. Enzymatic methods (e.g., lactose/galactose kits) are fast and low-cost but cannot simultaneously quantify multiple carbohydrates or distinguish lactose from lactulose. Thus, HPAEC-PAD is preferred for lactose-free product certification, whereas enzymatic methods are suitable only for initial screening (Monti et al., 2017).

5.3 Organic acids

Organic acids in milk and dairy products, such as lactic, malic, citric, formic, and succinic acids, are crucial for sensory attributes (flavor, aroma), cheese ripening, nutritional value, and food safety (Toldrá & Nollet, 2021). Produced naturally by the lactic microbiota during fermentation or added as preservatives, excessive levels can exceed regulatory limits and compromise product quality (Costa & Conte‐Junior, 2015).

Ion chromatography (IC) is the preferred method for quantifying these compounds and typically uses anion-exchange columns with suppressed conductivity detection, which provides low background noise and sensitivity in the µg/L range (Nesterenko et al., 2023). IC experimentation also allows the simultaneous analysis of inorganic anions (Cl−, NO3−) and organic acids in a single run, optimizing productivity and simplifying sample preparation to a single aqueous extraction (Falchi et al., 2023).

Behbahani et al. (2023) employed IC with conductometric detection to monitor lactic, propionic, and acetic acids in bioprotective yogurt cultures and demonstrated synergistic fungistatic effects associated with desirable sensory development. Falchi et al. (2023) developed a rapid method to quantify chloride and lactic acid in cheeses, with high recoveries and without derivatization. Xiong et al. (2014) applied IC‒MS to yogurts and quantified 16 organic acids with optimized quantification limits and high reproducibility.

IC offers selectivity and analytical robustness for monitoring organic acids in dairy products, making it indispensable for quality assurance, food safety, and technological innovation in the sector. Table 5 summarizes the IC methods used in the quantification of organic acids in milk and dairy products.

Table 5
Applications of ion chromatography for organic acid determination in dairy products.

Suppressed conductivity IC is particularly advantageous for non-chromophoric organic acids (e.g., lactic, propionic, and acetic acids), as it requires no pre- or post-column derivatization. In contrast, HPLC-UV requires low wavelengths (e.g., 210 nm), thereby increasing susceptibility to matrix interference. LC‒MS offers higher specificity and the ability to identify low concentrations, but its high cost and complexity limit its routine use. Conductivity IC represents an ideal balance of cost, robustness, and analytical capacity for monitoring organic acids in fermented dairy products (Costa & Conte‐Junior, 2015; Xiong et al., 2014).

5.4 Amino acids, peptides, and ammonium

Amino acids are fundamental protein building blocks that influence functional properties (Maillard reactions, gel formation, and antioxidant activity) and sensory attributes (flavor, aroma, and texture). Post-column ninhydrin derivatization with ion chromatography (IC) and photometric detection effectively quantifies free amino acids in dairy products. Hogenboom et al. (2017) applied IC-ninhydrin to profile amino acids in Grana Padano cheese, elucidating maturation and authenticity, and extended the method to milk, yogurt, infant formulas, and whey with high reproducibility.

Charged peptides can be separated by cation or anion-exchange ICs, although the efficiency is lower than that of reversed-phase chromatography for high-molecular-weight species (Sforza et al., 2011). UV‒Vis detectors provide protein profiles, whereas MS can be used to identify specific proteins. IC‒MS has shown potential for allergen analysis and the detection of post-translational modifications, but dairy applications remain scarce (Fanali et al., 2023).

Ammonium (NH4+) originates from the enzymatic deamidation of amino acids and urea degradation during thermal processing and cheese maturation (Gaucheron & Le Graet, 2000). Cation-exchange IC with conductometric detection is the standard method for its quantification in milk, whey, and caseinates, offering accurate measurements with minimal matrix interference (Michalski & Pecyna-Utylska, 2021).

Biogenic amines (histamines, tyramine, and cadaverine) result from the microbial decarboxylation of amino acids in mature cheeses. IC with suppressed conductometric detection has been used to quantify these amines with minimal sample preparation, although the resolution is lower than that of LC‒MS methods, limiting comprehensive profiling (Rivoira et al., 2019). Table 6 summarizes the applications of IC for quantifying amino acids, ammonium, and amines in dairy products.

Table 6
Applications of ion chromatography for the determination of amino acids, ammonium, and amines in dairy products.

Post-column ninhydrin derivatization IC is a consolidated, interlaboratory-validated method for the analysis of free amino acids in cheese and other dairy products (Hogenboom et al., 2017). However, UHPLC-FLD with pre-column derivatization offers higher sensitivity (detection limits of nmol/L) and shorter analysis times. The main advantage of IC is the absence of pre-column derivatization, which reduces the preparation time and eliminates variability in derivatization efficiency. For ammonium, conductivity IC is the method of choice, as enzymatic methods are susceptible to interference from the dairy matrix (Hogenboom et al., 2017).

5.5 Choline (vitamin B8)

Vitamin B8, or choline, which is present in high concentrations in cow milk, is essential for maintaining cell membrane, liver, and muscle functions and contributes to healthy brain development (Shetty et al., 2020).

Wei et al. (2017) proposed a method that allowed the simultaneous determination of L-carnitine, choline, and mineral ions in infant formulas, powdered milk, and milk. Dionex (2002) and Suess (2021) applied microwave digestion to analyze choline in infant formulas and powdered milk. Table 7 summarizes the applications of ion chromatography in the analysis of choline in dairy products.

Table 7
Applications of ion chromatography for choline determination in dairy products.

Suppressed-conductivity IC (Association of Official Analytical Collaboration International, 2012) is robust, requires no derivatization, and is moderately priced, making it ideal for routine analysis. In contrast, HPLC‒MS/MS offers lower detection limits (ng/mL) and multivitamin analysis but requires greater investment and greater technical expertise. Enzymatic methods are fast and inexpensive but less specific, unable to distinguish different forms of choline in milk (Association of Official Analytical Collaboration International, 2012).

5.6 Contaminants

Monitoring contaminants in dairy products can be achieved using ion chromatography (IC), which complies with international regulations and supports food safety (Poitevin, 2016).

IC quantifies nitrite and nitrate from additives and agricultural residues with suppressed conductometric detection, which requires pretreatment with acetic acid and NaOH to remove proteins and lipids (Chamandust et al., 2016; Wang et al., 2018). Biogenic amines (histamines and tyramine) are formed by microbial decarboxylation during cheese maturation and can be simultaneously quantified by IC with suppressed conductivity, with pulsed amperometric detection increasing specificity (Linares et al., 2011; Nesterenko et al., 2023). Arsenic reflects soil and water contamination and is determined by IC‒MS after acid digestion, allowing essential speciation for chronic risk assessment (Nesterenko et al., 2023; Permigiani et al., 2024). IC quantifies total chromium with post-column derivatization, whereas after alkaline extraction, Cr6+, which is highly toxic and carcinogenic, requires IC-MS (Hernandez et al., 2017; Mohana Rangan et al., 2021; Muntean, 2022). Perchlorate originates from fertilizers and industrial pollution and inhibits iodine uptake by the thyroid; it can be quantified by IC with suppressed conductivity and IC‒MS at trace levels (Dyke et al., 2006; Nesterenko et al., 2023; Nobile et al., 2022). Phosphates used as stabilizers (orthophosphate, pyrophosphate, triphosphate, tripolyphosphate, and hexametaphosphate) are simultaneously analyzed by IC on anion-exchange columns after deproteinization and defatting (Xie et al., 2020). Thiocyanate activates the lactoperoxidase system and can generate toxic cyanide; Jiang et al. (2021) developed a protocol with an aqueous biphasic system (acetonitrile/ammonium sulfate) followed by IC for rapid and sensitive determination in raw milk. Table 8 presents the IC methods used to determine contaminants in dairy products.

Table 8
Applications of ion chromatography for contaminant determination in dairy products.

For inorganic contaminants (nitrate, nitrite, perchlorate, and chromate), a suppressed-conductivity IC is often the official method (AOAC or ISO) because of simultaneous multi-anion separation. In contrast, spectrophotometric methods (e.g., the Griess reaction for nitrite) are single-analyte specific and more prone to matrix color interference. For the speciation of toxic elements (arsenic, chromium, and selenium), IC‒ICP‒MS is the most powerful technique, combining ionic separation with ultrasensitive detection. However, its high acquisition and maintenance costs limit its use in reference laboratories. For routine nitrate/nitrite analysis in dairy products, conductivity IC remains the most cost-effective and reliable technique (Iammarino et al., 2013).

6 Application of ion chromatography in the assessment of the quality and compliance of dairy products

Ion chromatography (IC) stands out as a precise and reliable analytical technique accepted by regulatory agencies as an official method for quantifying ionic compounds in food, allowing the development of analytical approaches that ensure compliance with regional and international regulations (Metrohm, 2022a; Muntean, 2022). Its integration into dairy quality control (Table 9) represents a significant advance, particularly in ensuring regulatory compliance and promoting continuous improvement in food quality and safety.

Table 9
Standards and regulations for analytical methods and ion chromatography for dairy products.

The integration of ion chromatography (IC) into dairy quality control enables the detailed determination of ionic composition, which is vital for regulatory compliance and food safety.

Figure 3 shows three ion-exchange chromatograms of dairy matrices, illustrating how the resin, elution conditions, and detection methods influence analytical performance (Iammarino et al., 2011; Nair & Corredig, 2021; Thienel & Jensen, 2018). In Figure 3A, a weak ion-exchange column with conductivity detection was used to detect benzoic acid in cheese with ppm-level sensitivity. As shown in Figure 3B, HPAEC-PAD resolves lactose and lactulose in lactose-free milk and cream cheese. Figure 3C shows the cation-exchange profile of skim milk, with peaks for β-casein, αs-casein, and κ-casein; UV/conductivity detection captures changes in protein distribution due to the addition of formulation or caseinate.

Figure 3
Composite ion exchange chromatograms of dairy products: (A) Weak anion exchange/conductivity chromatogram highlighting benzoic acid in a non-compliant cheese sample. (B) High-performance anion exchange (HPAEC-PAD) separation of lactose and lactulose in lactose-free milk and cream cheese. (C) Cation-exchange chromatograms of skim milk concentrates, comparing the elutions of β-casein, αs-casein, and κ-casein under control, concentrate, and sodium caseinate-supplemented conditions.

While Figures 2A/2C use continuous gradients for high resolution, Figure 3B optimizes stepwise elution for productivity. Matrix effects are evident: cheeses with high fat/salt content (3A) require rigorous cleaning; aqueous lactose-free formulations (3B) allow for simpler conditions. The results suggest future optimizations: longer anionic columns to refine sugar peaks, coupling with mass spectrometry for rapid protein profiling, and adapting preparation protocols to each submatrix. The choice of column, elution, and detector must be balanced with the analytical objective, whether it is to detect preservatives, certify “lactose-free,” identify adulteration, or characterize protein fractions.

7 Future perspectives and recent developments

Ion chromatography has evolved significantly since its beginning in 1975, and future trends point toward greater automation, miniaturization, and integration with high-resolution techniques (Figure 3).

7.1 Two-dimensional ion chromatography (2D-IC)

2D-IC uses valve switching to move fractions from the first column to a second column with a distinct separation mechanism. This approach significantly increases resolution for complex matrices, such as whey protein hydrolysates, enabling separation of peptides with very similar charges (Liu et al., 2015; Yang et al., 2023). Applications in dairy products remain scarce, representing a research opportunity.

7.2 IC coupled to high-resolution mass spectrometry (HRMS)

IC-HRMS coupling enables non-targeted identification of emerging contaminants in milk and dairy products, including polar pesticide residues, disinfection by-products (chlorate, perchlorate, bromate), and natural toxins. Unlike IC‒ICP‒MS, which focuses on elemental speciation, IC‒HRMS provides structural information, allowing the identification of unknown compounds without analytical standards (Bigard et al., 2023; Bruggink & Jensen, 2021; Liu et al., 2015).

7.3 Miniaturization and capillary IC

Capillary columns (0.1–0.5 mm inner diameter) reduce eluent consumption by up to 100-fold compared with conventional analytical columns (4 mm inner diameter). This miniaturization aligns with green chemistry principles and facilitates coupling with mass spectrometers, as low flow rates (1–10 µL/min) are compatible with electrospray ionization sources (Liu et al., 2015; Muntean, 2022).

7.4 Automated online sample preparation

Inline dialysis systems and online solid-phase extraction (online SPE) are already commercially available and significantly reduce the analysis time and errors associated with manual preparation. For dairy products, integrating online deproteinization steps is a technical challenge (Liu et al., 2015) that must be addressed in the coming years.

7.5 Chemometrics and machine learning

The application of chemometric tools (PCA, PLS) and machine learning algorithms can optimize chromatographic conditions (gradient, eluent concentration, column temperature) (Alves et al., 2025) and aid in interpreting complex ionic profiles for the detection of adulteration in cheeses and protected designation of origin (PDO) milks. This approach, which is still emerging for IC in dairy products (Vatavali et al., 2020), represents one of the most promising frontiers in the field.

7.6 Sustainability and green chemistry

Future methodologies should prioritize non-toxic eluents, electrolytic eluent generation (RFIC), and waste reduction. IC is already ahead of other chromatographic techniques in this regard, but further improvements in column material biodegradability and eluent recycling are expected in the coming decade (Fanali et al., 2023; Muntean, 2022; Weiss, 2016).

8 Sustainable strategies and waste minimization

The concept of green analytical chemistry has driven the development of methods that minimize waste, reduce the use of toxic reagents, optimize costs, accelerate analyses, and enable simultaneous multi-analyte detection (D’Amore et al., 2021; Michalski & Pecyna-Utylska, 2021).

Ion chromatography (IC) aligns with the principles of sustainable analysis. Technological advances, including optimized elution gradients, next-generation suppressors, and miniaturization, allow low-impact eluents, reduced sample volumes, and elimination of organic solvents in most applications (Michalski & Pecyna-Utylska, 2021). Reagent-free IC (RF-IC) generates eluents in situ via membrane electrolysis, eliminating manual preparation, ensuring precise concentrations, improving reproducibility, and reducing costs (Fanali et al., 2023; Weiss, 2016).

Compared with classical methods (titrimetric, colorimetric, gravimetric, and electrochemical) and chromatographic techniques, IC demonstrates superior compliance with the 12 Principles of Green Chemistry. Unlike HPLC (methanol/acetonitrile/water mixtures) and GC (inert gases with derivatizing agents), IC employs aqueous saline eluents, reflecting its distinct physicochemical mechanisms (Fanali et al., 2023; McNair et al., 2019; Michalski & Pecyna-Utylska, 2021; Snyder et al., 2009). However, the limitations of IC include careful sample preparation, consumable costs (columns, PEEK components), and preventive maintenance requirements for high-pressure systems (Michalski & Pecyna-Utylska, 2021) (Table 10).

Table 10
The main reagents used in the chromatographic methods.

9 Conclusions

Ion chromatography is a well-established, reliable, and versatile analytical technique for quality control of dairy products. This review demonstrates that IC is routinely applied for the determination of minerals, carbohydrates, organic acids, amino acids, choline, and contaminants, with methods validated according to international standards (AOAC, ISO, IDF). The main gaps identified in the literature include (i) the absence of standardized IC protocols for amino acid and peptide profiling in dairy matrices; (ii) the limited application of IC-HRMS for non-target screening of emerging contaminants; and (iii) insufficient comparative studies assessing IC versus alternative techniques (ICP‒MS, LC‒MS) across different dairy products. The contribution of this review lies in its integrated approach, which connects theoretical fundamentals, practical applications, and regulatory requirements. The arrangement of analytical parameters (LOD, LOQ, recovery, and RSD) in comparative tables allows the selection of the most appropriate method for each application. The discussion of future trends, including miniaturization, automation, chemometrics, and green chemistry, provides a roadmap for methodological innovation, positioning IC as a key tool for ensuring the safety, authenticity, and regulatory compliance of dairy products.

Acknowledgements

The authors also acknowledge the support of the Federal Institute of Education, Science, and Technology of Southeast Minas Gerais - Rio Pomba Campus, which enabled Jhonatan Faria da Costa to complete this work.

Data Availability Statement

Research data is available in the body of the article.

Cite as:

Costa, J. F., Moraes, M. N., Correa, K. P., Fontes, E. A. F., Ribeiro, O. A. S., Mesquita, B. M. A. C., Oliveira, E. B., & Coimbra, J. S. R. (2026). Ion chromatography for dairy product analysis: a technical and regulatory review. Brazilian Journal of Food Technology, 29, e2026025. https://doi.org/10.1590/1981-6723.0252026

Funding:

Conselho Nacional de Desenvolvimento Científico e Tecnológico (313641/2021-8), Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Financial code – 001) and Fundação de Amparo à Pesquisa do Estado de Minas Gerais.

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*

Corresponding Author: Jane Sélia dos Reis Coimbra, Universidade Federal de Viçosa, Departamento de Tecnologia de Alimentos, Avenida Peter Henry Rolfs, s/n, CEP: 36570-900, Viçosa/MG - Brasil, e-mail: jcoimbra@ufv.br

Conflict of interests

The authors report no potential conflicts of interest.

Section Editor:

Marta H. Taniwaki.

Publication Dates

  • Publication in this collection
    21 Sept 2026
  • Date of issue
    2026

History

  • Received
    07 Apr 2026
  • Accepted
    20 July 2026
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